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Trajectory Approach to Two-State Kinetics of Single Particles on Sculpted Energy Landscapes

Wu, David and Ghosh, Kingshuk and Inamdar, Mandar and Lee, Heun Jin and Fraser, Scott and Dill, Ken and Phillips, Rob (2009) Trajectory Approach to Two-State Kinetics of Single Particles on Sculpted Energy Landscapes. Physical Review Letters, 103 (5). 050603. ISSN 0031-9007 http://resolver.caltech.edu/CaltechAUTHORS:20090817-144809908

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Abstract

We study the trajectories of a single colloidal particle as it hops between two energy wells which are sculpted using optical traps. Whereas the dynamical behaviors of such systems are often treated by master-equation methods that focus on particles as actors, we analyze them instead using a trajectory-based variational method called maximum caliber (MaxCal). We show that the MaxCal strategy accurately predicts the full dynamics that we observe in the experiments: From the observed averages, it predicts second and third moments and covariances, with no free parameters. The covariances are the dynamical equivalents of Maxwell-like equilibrium reciprocal relations and Onsager-like dynamical relations.


Item Type:Article
Additional Information:©2009 The American Physical Society. Received 3 March 2008; published 31 July 2009. We are grateful to Dave Drabold, Jane Kondev, Keir Neuman, and Dan Gillespie for helpful comments. K. D. appreciates the support of NIH Grant No. GM 34993 and a UCSF Sandler Blue Sky grant. D.W. acknowledges the support of a NIH UCLA-Caltech MD-PhD grant. This work was also supported by the NIH Director’s Pioneer grant to R. P.
Funders:
Funding AgencyGrant Number
NIHGM 34993
UCLAUNSPECIFIED
Subject Keywords:PACS: 05.40.-a; 02.50.Fz; 02.50.Tt; 05.45.Tp
Record Number:CaltechAUTHORS:20090817-144809908
Persistent URL:http://resolver.caltech.edu/CaltechAUTHORS:20090817-144809908
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Official Citation:Trajectory Approach to Two-State Kinetics of Single Particles on Sculpted Energy Landscapes David Wu, Kingshuk Ghosh, Mandar Inamdar, Heun Jin Lee, Scott Fraser, Ken Dill, and Rob Phillips, Phys. Rev. Lett. 103, 050603 (2009), DOI:10.1103/PhysRevLett.103.050603
Usage Policy:No commercial reproduction, distribution, display or performance rights in this work are provided.
ID Code:15083
Collection:CaltechAUTHORS
Deposited By: George Porter
Deposited On:09 Sep 2009 15:42
Last Modified:26 Dec 2012 11:12

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