All plots illustrate the sample mean distance of each genotype group from wild-type. Individual genotype groups are colored by the current evidence for ASD-association of the corresponding gene according to Satterstrom et al. (2019) (see main text for citation). The Satterstrom et al. categories denote evidence for ASD-association from strongest to weakest: FWER ≤ 0.05, FDR ≤ 0.05, FDR ≤ 0.1, None (no categorization). Strains outside the 95% confidence interval of the wild-type distribution are labeled. Only a maximum of five strains are labeled in each direction per feature to prevent over plotting. Several parameters of the plots can be modified by altering the parameters in the code below.

## Configure your parameters here

NSEEDS=1 # Number of different version of the label repelling 
showLabels=TRUE # Whether to show the labels or not
repulsion=30 # How strong the repulsion of labels are. We've used 30 and 50.
strainsPerSides=5 # To control overplotting, we're limiting the number of labels shown to maximum 10 on each side of the wild-type.

Gene by phenotype effect.