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A gut-derived metabolite alters brain activity and anxiety behaviour in mice

Needham, Brittany D. and Funabashi, Masanori and Adame, Mark D. and Wang, Zhuo and Boktor, Joseph C. and Haney, Jillian and Wu, Wei-Li and Rabut, Claire and Ladinsky, Mark S. and Hwang, Son-Jong and Guo, Yumei and Zhu, Qiyun and Griffiths, Jessica A. and Knight, Rob and Bjorkman, Pamela J. and Shapiro, Mikhail G. and Geschwind, Daniel H. and Holschneider, Daniel P. and Fischbach, Michael A. and Mazmanian, Sarkis K. (2022) A gut-derived metabolite alters brain activity and anxiety behaviour in mice. Nature, 602 (7899). pp. 647-653. ISSN 0028-0836. PMCID PMC9170029. doi:10.1038/s41586-022-04396-8. https://resolver.caltech.edu/CaltechAUTHORS:20220214-859281700

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Abstract

Integration of sensory and molecular inputs from the environment shapes animal behaviour. A major site of exposure to environmental molecules is the gastrointestinal tract, in which dietary components are chemically transformed by the microbiota and gut-derived metabolites are disseminated to all organs, including the brain. In mice, the gut microbiota impacts behaviour, modulates neurotransmitter production in the gut and brain, and influences brain development and myelination patterns. The mechanisms that mediate the gut–brain interactions remain poorly defined, although they broadly involve humoral or neuronal connections. We previously reported that the levels of the microbial metabolite 4-ethylphenyl sulfate (4EPS) were increased in a mouse model of atypical neurodevelopment. Here we identified biosynthetic genes from the gut microbiome that mediate the conversion of dietary tyrosine to 4-ethylphenol (4EP), and bioengineered gut bacteria to selectively produce 4EPS in mice. 4EPS entered the brain and was associated with changes in region-specific activity and functional connectivity. Gene expression signatures revealed altered oligodendrocyte function in the brain, and 4EPS impaired oligodendrocyte maturation in mice and decreased oligodendrocyte–neuron interactions in ex vivo brain cultures. Mice colonized with 4EP-producing bacteria exhibited reduced myelination of neuronal axons. Altered myelination dynamics in the brain have been associated with behavioural outcomes. Accordingly, we observed that mice exposed to 4EPS displayed anxiety-like behaviours, and pharmacological treatments that promote oligodendrocyte differentiation prevented the behavioural effects of 4EPS. These findings reveal that a gut-derived molecule influences complex behaviours in mice through effects on oligodendrocyte function and myelin patterning in the brain.


Item Type:Article
Related URLs:
URLURL TypeDescription
https://doi.org/10.1038/s41586-022-04396-8DOIArticle
https://rdcu.be/cGZ9KPublisherFree ReadCube access
https://gin.g-node.org/bneedham/Needham_Nature_2022Related Item2DG data
https://biocore.github.io/wol/downloadRelated ItemWoL database
https://greengenes.secondgenome.com/Related ItemGreengenes database
https://github.com/brittanyneedham/Needham_Nature2022Related ItemCustom scripts
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9170029PubMed CentralArticle
ORCID:
AuthorORCID
Needham, Brittany D.0000-0002-0280-1886
Boktor, Joseph C.0000-0003-2456-1913
Haney, Jillian0000-0001-5847-9892
Wu, Wei-Li0000-0003-2610-1881
Rabut, Claire0000-0002-4571-1215
Ladinsky, Mark S.0000-0002-1036-3513
Hwang, Son-Jong0000-0002-3210-466X
Zhu, Qiyun0000-0002-3568-6271
Griffiths, Jessica A.0000-0002-5586-1567
Knight, Rob0000-0002-0975-9019
Bjorkman, Pamela J.0000-0002-2277-3990
Shapiro, Mikhail G.0000-0002-0291-4215
Geschwind, Daniel H.0000-0003-2896-3450
Holschneider, Daniel P.0000-0002-4297-8280
Fischbach, Michael A.0000-0003-3079-8247
Mazmanian, Sarkis K.0000-0003-2713-1513
Additional Information:© 2022 Nature Publishing Group. Received 11 June 2020; Accepted 02 January 2022; Published 14 February 2022. We thank the members of the Mazmanian laboratory for evaluating the manuscript; S. Reisman and L. Chapman (Caltech) for synthesizing 4EPS; the staff at the Caltech Kavli Nanoscience Institute for help with maintaining the TF30 electron microscope, and the Gordon and Betty Moore and Beckman Foundations for gifts to Caltech to support electron microscopy. This work was supported by funds from the Center for Environmental Microbial Interactions to B.D.N., National Science Foundation MRI grant 1920364 for Bruker console upgrading, the Human Frontier Science Program (grant no. LT000217/2020-C) to C.R., the National Institutes of Health (NIH) (2 P50 GM082545-08) to P.J.B., the Ministry of Science and Technology in Taiwan (MOST107-2320-B-006-072-MY3; MOST108-2321-B-006-025-MY2) to W.-L.W., and the Heritage Medical Research Institute, L. and B. Fetter, and the NIH (MH100556 and AG063744) to S.K.M. Data availability: All data analysed for this study are included in this published Article and its Supplementary Information. Additional 2DG data are available online (https://gin.g-node.org/bneedham/Needham_Nature_2022). The WoL database annotation files are publicly available at GitHub (https://biocore.github.io/wol/download). The Greengenes database is publicly available online (https://greengenes.secondgenome.com/). Source data are provided with this paper. Code availability: Custom scripts used in the fUSi analysis are available at GitHub (https://github.com/brittanyneedham/Needham_Nature2022). Author Contributions: Conceptualization: B.D.N. and S.K.M. Methodology: B.D.N., M.F., M.D.A., Z.W., W.-L.W., J.H., M.S.L., J.A.G., C.R., S.-J.H. and D.P.H. Formal analysis: B.D.N., M.D.A., Z.W. and J.H. Investigation: B.D.N., M.F., M.D.A., Z.W., W.-L.W., J.C.B., C.R., J.H., S.-J.H., Q.Z., M.S.L. and Y.G. Biochemical pathway investigation and strain engineering: M.F. and M.A.F. Gene abundance analysis: Q.Z., J.C.B. and R.K. fUSi imaging: C.R., J.C.B., B.D.N. and M.G.S. 2DG analysis: Z.W., B.D.N., Y.G. and D.P.H. QuantSeq analysis: J.H., W.-L.W., B.D.N. and D.H.G. Oligodendrocyte characterization: B.D.N., M.D.A., J.C.B., M.S.L. and J.A.G. ET: M.S.L., B.D.N. and M.D.A. MRI/diffusion tensor imaging: S.-J.H. and B.D.N. Animal behaviour: B.D.N. and M.D.A. Resources: P.J.B., D.G., D.P.H., M.A.F., R.K., M.G.S. and S.K.M. Writing original draft: B.D.N. Writing review and editing: B.D.N., M.F., M.D.A., Z.W., W.-L.W., J.H., M.S.L., J.A.G., D.P.H., M.A.F. and S.K.M. Visualization: B.D.N., M.F., M.D.A., Z.W., W.-L.W., J.H., J.C.B., C.R., S.-J.H., M.S.L. and M.A.F. Supervision: S.K.M. Project administration: B.D.N. Funding acquisition: B.D.N., W.-L.W., P.J.B. and S.K.M. Competing interests: S.K.M. has financial interests in Axial Biotherapeutics. The other authors declare no competing interests. Peer review information: Nature thanks Gabriel Corfas, Jane Foster, Robert Quinn and the other, anonymous, reviewer(s) for their contribution to the peer review of this work.
Group:Heritage Medical Research Institute, Caltech Center for Environmental Microbial Interactions (CEMI), Kavli Nanoscience Institute
Funders:
Funding AgencyGrant Number
Caltech Center for Environmental Microbial Interactions (CEMI)UNSPECIFIED
NSFMRI-1920364
Human Frontier Science ProgramLT000217/2020-C
NIH2 P50 GM082545-08
Ministry of Science and Technology (Taipei)MOST107-2320-B-006-072-MY3
Ministry of Science and Technology (Taipei)MOST108-2321-B-006-025-MY2
Heritage Medical Research InstituteUNSPECIFIED
NIHMH100556
NIHAG063744
Gordon and Betty Moore FoundationUNSPECIFIED
Subject Keywords:Bacterial genes; Bacterial host response; Myelin biology and repair
Issue or Number:7899
PubMed Central ID:PMC9170029
DOI:10.1038/s41586-022-04396-8
Record Number:CaltechAUTHORS:20220214-859281700
Persistent URL:https://resolver.caltech.edu/CaltechAUTHORS:20220214-859281700
Official Citation:Needham, B.D., Funabashi, M., Adame, M.D. et al. A gut-derived metabolite alters brain activity and anxiety behaviour in mice. Nature 602, 647–653 (2022). https://doi.org/10.1038/s41586-022-04396-8
Usage Policy:No commercial reproduction, distribution, display or performance rights in this work are provided.
ID Code:113440
Collection:CaltechAUTHORS
Deposited By: Tony Diaz
Deposited On:14 Feb 2022 19:11
Last Modified:14 Jun 2022 17:26

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