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Back-electron transfer suppresses the periodic length dependence of DNA-mediated charge transport across adenine tracts

Genereux, Joseph C. and Augustyn, Katherine E. and Davis, Molly L. and Shao, Fangwei and Barton, Jacqueline K. (2008) Back-electron transfer suppresses the periodic length dependence of DNA-mediated charge transport across adenine tracts. Journal of the American Chemical Society, 130 (45). pp. 15150-15156. ISSN 0002-7863. PMCID PMC2663386. https://resolver.caltech.edu/CaltechAUTHORS:20090504-093543546

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Abstract

DNA-mediated charge transport (CT) is exquisitely sensitive to the integrity of the bridging π-stack and is characterized by a shallow distance dependence. These properties are obscured by poor coupling between the donor/acceptor pair and the DNA bridge, or by convolution with other processes. Previously, we found a surprising periodic length dependence for the rate of DNA-mediated CT across adenine tracts monitored by 2-aminopurine fluorescence. Here we report a similar periodicity by monitoring N2-cyclopropylguanosine decomposition by rhodium and anthraquinone photooxidants. Furthermore, we find that this periodicity is attenuated by consequent back-electron transfer (BET), as observed by direct comparison between sequences that allow and suppress BET. Thus, the periodicity can be controlled by engineering the extent of BET across the bridge. The periodic length dependence is not consistent with a periodicity predicted by molecular wire theory but is consistent with a model where multiples of four to five base pairs form an ideal CT-active length of a bridging adenine domain.


Item Type:Article
Related URLs:
URLURL TypeDescription
http://dx.doi.org/10.1021/ja8052738DOIArticle
http://pubs.acs.org/doi/suppl/10.1021/ja8052738PublisherSupporting Information
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2663386/PubMed CentralArticle
ORCID:
AuthorORCID
Genereux, Joseph C.0000-0002-5093-7710
Shao, Fangwei0000-0003-2007-3920
Barton, Jacqueline K.0000-0001-9883-1600
Additional Information:© 2008 American Chemical Society. Received: July 08, 2008. Published In Issue November 12, 2008. We are grateful to the National Institutes of Health (NIH; Grant GM49216) for their support. We thank also the Caltech SURF program for a summer undergraduate fellowship (M.L.D.). In addition, we are grateful for the helpful comments provided by our reviewers.
Funders:
Funding AgencyGrant Number
NIHGM49216
Caltech Summer Undergraduate Research Fellowship (SURF)UNSPECIFIED
Subject Keywords:range oxidative damage; double-helical DNA; duplex DNA; hole transfer; guanine oxidation; radical reactions; molecular wires; base stacking; distance; separation
Issue or Number:45
PubMed Central ID:PMC2663386
Record Number:CaltechAUTHORS:20090504-093543546
Persistent URL:https://resolver.caltech.edu/CaltechAUTHORS:20090504-093543546
Official Citation:Back-Electron Transfer Suppresses the Periodic Length Dependence of DNA-Mediated Charge Transport across Adenine Tracts Joseph C. Genereux, Katherine E. Augustyn, Molly L. Davis, Fangwei Shao, and Jacqueline K. Barton Journal of the American Chemical Society 2008 130 (45), 15150-15156 DOI: 10.1021/ja8052738
Usage Policy:No commercial reproduction, distribution, display or performance rights in this work are provided.
ID Code:14140
Collection:CaltechAUTHORS
Deposited By: Joy Painter
Deposited On:10 Aug 2009 22:59
Last Modified:14 Feb 2020 17:37

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