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Shewanella oneidensis MR-1 Uses Overlapping Pathways for Iron Reduction at a Distance and by Direct Contact under Conditions Relevant for Biofilms

Lies, Douglas P. and Hernandez, Maria E. and Kappler, Andreas and Mielke, Randall E. and Gralnick, Jeffrey A. and Newman, Dianne K. (2005) Shewanella oneidensis MR-1 Uses Overlapping Pathways for Iron Reduction at a Distance and by Direct Contact under Conditions Relevant for Biofilms. Applied and Environmental Microbiology, 71 (8). pp. 4414-4426. ISSN 0099-2240. PMCID PMC1183279.

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We developed a new method to measure iron reduction at a distance based on depositing Fe(III) (hydr)oxide within nanoporous glass beads. In this "Fe-bead" system, Shewanella oneidensis reduces at least 86.5% of the iron in the absence of direct contact. Biofilm formation accompanies Fe-bead reduction and is observable both macro- and microscopically. Fe-bead reduction is catalyzed by live cells adapted to anaerobic conditions, and maximal reduction rates require sustained protein synthesis. The amount of reactive ferric iron in the Fe-bead system is available in excess such that the rate of Fe-bead reduction is directly proportional to cell density; i.e., it is diffusion limited. Addition of either lysates prepared from anaerobic cells or exogenous electron shuttles stimulates Fe-bead reduction by S. oneidensis, but iron chelators or additional Fe(II) do not. Neither dissolved Fe(III) nor electron shuttling activity was detected in culture supernatants, implying that the mediator is retained within the biofilm matrix. Strains with mutations in omcB or mtrB show about 50% of the wild-type levels of reduction, while a cymA mutant shows less than 20% of the wild-type levels of reduction and a menF mutant shows insignificant reduction. The Fe-bead reduction defect of the menF mutant can be restored by addition of menaquinone, but menaquinone itself cannot stimulate Fe-bead reduction. Because the menF gene encodes the first committed step of menaquinone biosynthesis, no intermediates of the menaquinone biosynthetic pathway are used as diffusible mediators by this organism to promote iron reduction at a distance. CymA and menaquinone are required for both direct and indirect mineral reduction, whereas MtrB and OmcB contribute to but are not absolutely required for iron reduction at a distance.

Item Type:Article
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URLURL TypeDescription CentralArticle
Gralnick, Jeffrey A.0000-0001-9250-7770
Newman, Dianne K.0000-0003-1647-1918
Additional Information:© 2005, American Society for Microbiology. Received 27 May 2004/ Accepted 20 February 2005 Grant support from the Office of Naval Research, the Luce Foundation, and the Packard Foundation to D.K.N. is gratefully acknowledged. A.K. received support from the DFG. We thank Manisha Lotlikar and the 2003 International Geobiology class for technical assistance; Scott Fendorf, Kevin Rosso, Javier Gonzalez, and members of the Newman lab for helpful discussions; and Kristina Straub and three anonymous reviewers for critical comments that improved the manuscript.
Funding AgencyGrant Number
Office of Naval Research (ONR)UNSPECIFIED
Henry Luce FoundationUNSPECIFIED
David and Lucile Packard FoundationUNSPECIFIED
Deutsche Forschungsgemeinschaft (DFG)UNSPECIFIED
Issue or Number:8
PubMed Central ID:PMC1183279
Record Number:CaltechAUTHORS:LIEaem05
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Usage Policy:No commercial reproduction, distribution, display or performance rights in this work are provided.
ID Code:1821
Deposited By: Archive Administrator
Deposited On:19 Feb 2006
Last Modified:02 Oct 2019 22:47

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