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The ERATO Systems Biology Workbench: Architectural Evolution

Hucka, Michael and Finney, Andrew and Sauro, Herbert and Bolouri, Hamid and Doyle, John and Kitano, Hiroaki (2001) The ERATO Systems Biology Workbench: Architectural Evolution. In: Proceedings of the second International Conference on Systems Biology. Omnipress , Madison, WI, pp. 352-361. ISBN 9781591350002.

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Systems biology researchers make use of a large number of different software packages for computational modeling and analysis as well as data manipulation and visualization. To help developers easily provide the ability for their applications to communicate with other tools, we have developed a simple, open-source, application integration framework, the ERATO Systems Biology Workbench (SBW). In this paper, we discuss the architecture of SBW, focusing on our motivations for various design decisions including the choice of the message-oriented communications infrastructure.

Item Type:Book Section
Hucka, Michael0000-0001-9105-5960
Doyle, John0000-0002-1828-2486
Additional Information:© 2001 Omnipress.
Record Number:CaltechAUTHORS:20130104-163929932
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Usage Policy:No commercial reproduction, distribution, display or performance rights in this work are provided.
ID Code:36187
Deposited By: Linda Taddeo
Deposited On:07 Jan 2013 15:57
Last Modified:26 Nov 2019 11:15

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