Molecular Evolution Activities

   
Molecular Evolution Bibliographies
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S. L. Page, C. Chiu and M. Goodman, "Molecular phylogeny of Old World monkeys (Cercopithecidae) as inferred from gamma-globin DNA sequences," Molecular Phylogenetics & Evolution, 13 (1999), 348-59.
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L·szlÛ Patthy, Protein evolution (Oxford [England]; Malden, MA: Blackwell Science, 1999).
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Y. Satta et al., "Molecular clock and recombination in primate Mhc genes," Immunological Reviews, 167 (1999), 367-79.
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P. Simmonds and D. B. Smith, "Structural constraints on RNA virus evolution," Journal of Virology, 73 (1999), 5787-94.
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Colin Patterson, Evolution (Ithaca, N.Y.: Comstock Pub. Associates, 1999).
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N. G. Smith and L. D. Hurst, "The effect of tandem substitutions on the correlation between synonymous and nonsynonymous rates in rodents," Genetics, 153 (1999), 1395-402.
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John J. Holland, Esteban Domingo and Robert G. Webster, Origin and evolution of viruses (San Diego, Calif.: Academic Press, 1999).
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R.G Reeves and Newcastle upon Tyne Univ. (GB), Molecular zoogeography and evolution of primary freshwater fishes in Central-America (: Thesis (Ph.D.), 1999).
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H. Tang and R. C. Lewontin, "Locating regions of differential variability in DNA and protein sequences," Genetics, 153 (1999), 485-495.
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N. J. Tourasse and W. H. Li, "Performance of the relative-rate test under nonstationary models of nucleotide substitution," Molecular Biology & Evolution, 16 (1999), 1068-78.
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J. M. Waters and C. P. Burridge, "Extreme intraspecific mitochondrial DNA sequence divergence in Galaxias maculatus (Osteichthys: Galaxiidae), one of the world's most widespread freshwater fish," Molecular Phylogenetics & Evolution, 11 (1999), 1-12.
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J. Zhang, "Performance of likelihood ratio tests of evolutionary hypotheses under inadequate substitution models," Molecular Biology & Evolution, 16 (1999), 868-75.
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G. Zhang et al., "Molecular evolution of swine vesicular disease virus," Journal of General Virology, 80 (1999), 639-51.
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R. Zardoya and I. Doadrio, "Molecular evidence on the evolutionary and biogeographical patterns of European cyprinids," Journal of Molecular Evolution, 49 (1999), 227-37.
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F. J. Ayala, "Molecular clock mirages," Bioessays, 21 (1999), 71-75.
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E. Zuckerkandl, "Sectorial gene repression in the control of development," Gene, 238 (1999), 263-76.
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Austin L. Hughes, Adaptive evolution of genes and genomes (New York: Oxford University Press, 1999).
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Raymond F. Gesteland, Thomas Cech and John F. Atkins, The RNA world: the nature of modern RNA suggests a prebiotic RNA (Cold Spring Harbor, N.Y.: Cold Spring Harbor Laboratory Press, 1999).
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M. J. Ford, P. J. Thornton and L. K. Park, "Natural selection promotes divergence of transferrin among salmonid species," Molecular Ecology, 8 (1999), 1055-1061.
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S. Gavrilets, "A dynamical theory of speciation on holey adaptive landscapes," American Naturalist, 154 (1999), 1-22.
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R. C. Karn and M. W. Nachman, "Reduced nucleotide variability at an androgen-binding protein locus (Abpa) in house mice: Evidence for positive natural selection," Molecular Biology and Evolution, 16 (1999), 1192-1197.
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John Thomas Klicka, A molecular perspective on the evolution of North American songbirds (: Thesis (Ph. D.)--University of Minnesota, 1999, 1999).
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D. Tautz, "A genetic uncertainty problem," Trends in Genetics, 16 (2000), 475-477.
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J. P. Allain et al., "Evolutionary rate and genetic drift of hepatitis C virus are not correlated with the host immune response: studies of infected donor-recipient clusters," Journal of Virology, 74 (2000), 2541-9.
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F. J. Ayala, "Neutralism and selectionism: the molecular clock," Gene, 261 (2000), 27-33.
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T. Ohta, "Evolution of gene families," Gene, 259 (2000), 45-52.
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M. D. Bowen et al., "Genetic diversity among Lassa virus strains," Journal of Virology, 74 (2000), 6992-7004.
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J. F. Crow, "Anecdotal, historical and critical commentaries on genetics - Thomas H. Jukes (1906-1999)," Genetics, 154 (2000), 955-956.
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Y. Cao et al., "Interordinal relationships and timescale of eutherian evolution as inferred from mitochondrial genome data," Gene, 259 (2000), 149-58.
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H. Tachida, "DNA evolution under weak selection," Gene, 261 (2000), 3-9.
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H. Tachida, "Molecular evolution in a multisite nearly neutral mutation model," Journal of Molecular Evolution, 50 (2000), 69-81.
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T. Y. Chiang and B. A. Schaal, "Molecular evolution and phylogeny of the atpB-rbcL spacer of chloroplast DNA in the true mosses," Genome, 43 (2000), 417-26.
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T. H. Jukes, "The neutral theory of molecular evolution," Genetics, 154 (2000), 956-958.
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B. Lieb, B. Altenhein and J. Markl, "The sequence of a gastropod hemocyanin (HtH1 from Haliotis tuberculata)," Journal of Biological Chemistry, 275 (2000), 5675-81.
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C. Y. Valenzuela, "Misconceptions and false expectations in neutral evolution," Biological Research, 33 (2000), 187-195.
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H. S. Koh, W. J. Lee and T. D. Kocher, "The genetic relationships of two subspecies of striped field mice, Apodemus agrarius coreae and Apodemus agrarius chejuensis," Heredity, 85 (2000), 30-6.
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D. J. Cutler, "Understanding the overdispersed molecular clock," Genetics, 154 (2000), 1403-17.
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A. E. Goldfeld et al., "Post-genomics and the neutral theory: variation and conservation in the tumor necrosis factor-alpha promoter," Gene, 261 (2000), 19-25.
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D. J. Cutler, "Estimating divergence times in the presence of an overdispersed molecular clock," Molecular Biology & Evolution, 17 (2000), 1647-60.
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A. Drummond and A. G. Rodrigo, "Reconstructing genealogies of serial samples under the assumption of a molecular clock using serial-sample UPGMA," Molecular Biology & Evolution, 17 (2000), 1807-15.
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J. H. Gillespie, "The neutral theory in an infinite population," Gene, 261 (2000), 11-18.
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M. D. Bargues et al., "Nuclear rDNA-based molecular clock of the evolution of triatominae (Hemiptera: reduviidae), vectors of Chagas disease," Memorias do Instituto Oswaldo Cruz, 95 (2000), 567-73.
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K. J. Fryxell and E. Zuckerkandl, "Cytosine deamination plays a primary role in the evolution of mammalian isochores," Molecular Biology & Evolution, 17 (2000), 1371-83.
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F. Friedberg and A. R. Rhoads, "Calculation and verification of the ages of retroprocessed pseudogenes," Molecular Phylogenetics & Evolution, 16 (2000), 127-30.
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T. J. Givnish et al., "Molecular evolution, adaptive radiation, and geographic diversification in the amphiatlantic family Rapateaceae: evidence from ndhF sequences and morphology," Evolution, 54 (2000), 1915-37.
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Dan Graur and Wen-Hsiung Li, Fundamentals of molecular evolution (Sunderland, Mass.: Sinauer Associates, 2000).
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Y. Kumazawa and M. Nishida, "Molecular phylogeny of osteoglossoids: a new model for Gondwanian origin and plate tectonic transportation of the Asian arowana," Molecular Biology & Evolution, 17 (2000), 1869-78.
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N. V. Grishin, Y. I. Wolf and E. V. Koonin, "From complete genomes to measures of substitution rate variability within and between proteins," Genome Research, 10 (2000), 991-1000.
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G. A. Dover and Charles Darwin, Dear Mr. Darwin: letters on the evolution of life and human nature (London: Berkeley: Weidenfeld & Nicolson; University of California Press, 2000).
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Q. Y. Xiang et al., "Timing the eastern Asian-eastern North American floristic disjunction: molecular clock corroborates paleontological estimates," Molecular Phylogenetics & Evolution, 15 (2000), 462-72.
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