Molecular Evolution Activities

   
Molecular Evolution Bibliographies
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J. Rozas and R. Rozas, "DnaSP version 2.0: A novel software package for extensive molecular population genetics analysis," Computer Applications in the Biosciences, 13 (1997), 307-311.
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John Beatty, "Dobzhansky and Drift: Facts, Values, and Chance in Evolutionary Biology" () [book].
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R. C. Lewontin, "Dobzhansky's Genetics and the Origin of Species: Is it still relevant?," Genetics, 147 (1997), 351-355.
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M. Kimura, "Doubt About Studies of Globin Evolution Based on Maximum Parsimony Codons and the Augmentation Procedure," Journal of Molecular Evolution, 17 (1981), 121-122.
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S. Lawson et al., "Down-regulation of an abundant cellular protein associated with tumor progression," Carcinogenesis, 9 (1988), 2129-32.
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A. M. Bowcock et al., "Drift, Admixture, and Selection in Human-Evolution - a Study with DNA Polymorphisms," Proceedings of the National Academy of Sciences of the United States of America, 88 (1991), 839-843.
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Pierre Capy, Dynamic and evolution of transposable elements (New York: Austin, Tex: Springer; Landes Bioscience, 1998).
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Y. Kiho et al., "Dynamic aspects of protein function III. Comparison of homologous proteins isolated from various species," Proceedings of the Japan Academy Series B-Physical and Biological Sciences, 74 (1998), 174-178.
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T. H. Jukes, "Early Development of the Neutral Theory," Perspectives in Biology and Medicine, 34 (1991), 473-485.
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T. Ohta, "Effect of gene conversion on polymorphic patterns at major histocompatibility complex loci," Immunological Reviews, 167 (1999), 319-325.
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M. Kimura and J. F. Crow, "Effect of Overall Phenotypic Selection on Genetic Change at Individual Loci .1," Proceedings of the National Academy of Sciences of the United States of America, 75 (1978), 6168-6171.
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T. Ohta and M. Kimura, "Effect of Selected Linked Locus on Heterozygosity of Neutral Alleles (Hitch-Hiking Effect)," Genetical Research, 25 (1975), 313-326.
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N. Takahata, K. Ishii and H. Matsuda, "Effect of temporal fluctuation of selection coefficient on gene frequency in a population," Proceedings of the National Academy of Sciences of the United States of America, 72 (1975), 4541-5.
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W. B. Dunham et al., "Effects of intake of L-ascorbic acid on the incidence of dermal neoplasms induced in mice by ultraviolet light," Proceedings of the National Academy of Sciences of the United States of America, 79 (1982), 7532-6.
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J. F. Crow and M. Kimura, "Efficiency of Truncation Selection," Proceedings of the National Academy of Sciences of the United States of America, 76 (1979), 396-399.
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R. C. Lewontin, "Elementary Errors About Evolution," Behavioral and Brain Sciences, 6 (1983), 367-368.
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K. P. Johnson and J. Seger, "Elevated rates of nonsynonymous substitution in island birds," Molecular Biology and Evolution, 18 (2001), 874-881.
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C. K. Ong et al., "Elucidating the population histories and transmission dynamics of papillomaviruses using phylogenetic trees," Journal of Molecular Evolution, 44 (1997), 199-206.
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Y. Mitsui and T. Senda, "Elucidation of the basic three-dimensional structure of type I interferons and its functional and evolutionary implications," Journal of Interferon and Cytokine Research, 17 (1997), 319-326.
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M. Goodman, "Emerging alliance of phylogenetic systematics and molecular biology: A new age of exploration," in B. Fernholm, K. Bremer and H. Jornvall, eds., The Hierarchy of Life (New York: Plenum, 1989), 321-353.
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G. J. Morgan, "Emile Zuckerkandl, Linus Pauling, and the molecular evolutionary clock, 1959-1965," Journal of the History of Biology, 31 (1998), 155-178.
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P. Parham et al., "Episodic evolution and turnover of HLA-B in the indigenous human populations of the Americas," Tissue Antigens, 50 (1997), 219-32.
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R. S. Baric et al., "Episodic evolution mediates interspecies transfer of a murine coronavirus," Journal of Virology, 71 (1997), 1946-1955.
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M. W. Nachman and S. L. Crowell, "Estimate of the mutation rate per nucleotide in humans," Genetics, 156 (2000), 297-304.
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D. J. Cutler, "Estimating divergence times in the presence of an overdispersed molecular clock," Molecular Biology & Evolution, 17 (2000), 1647-60.
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D. J. Colgan, "Estimating selective coefficients of allelic substitutions from patterns of interspecific allozymic mobility difference," Heredity, 78 (1997), 655-664.
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A. Rambaut, "Estimating the rate of molecular evolution: incorporating non-contemporaneous sequences into maximum likelihood phylogenies," Bioinformatics, 16 (2000), 395-9.
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M. Nei, P. Xu and G. Glazko, "Estimation of divergence times from multiprotein sequences for a few mammalian species and several distantly related organisms," Proceedings of the National Academy of Sciences of the United States of America, 98 (2001), 2497-502.
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M. Kimura, "Estimation of Evolutionary Distances between Homologous Nucleotide-Sequences," Proceedings of the National Academy of Sciences of the United States of America-Biological Sciences, 78 (1981), 454-458.
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X. Gu and W. H. Li, "Estimation of evolutionary distances under stationary and nonstationary models of nucleotide substitution," Proceedings of the National Academy of Sciences of the United States of America, 95 (1998), 5899-905.
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A. D. Yoder and Z. Yang, "Estimation of primate speciation dates using local molecular clocks," Molecular Biology & Evolution, 17 (2000), 1081-90.
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W. F. Eanes, M. Kirchner and J. Yoon, "Evidence for adaptive evolution of the G6pd gene in the Drosophila melanogaster and Drosophila simulans lineages," Proceedings of the National Academy of Sciences of the United States of America, 90 (1993), 7475-9.
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W. F. Eanes, M. Kirchner and J. Yoon, "Evidence for Adaptive Evolution of the G6pd Gene in the Drosophila-Melanogaster and Drosophila-Simulans Lineages," Proceedings of the National Academy of Sciences of the United States of America, 90 (1993), 7475-7479.
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A. Machordom and I. Doadrio, "Evidence of a cenozoic Betic-Kabilian connection based on freshwater fish phylogeography (Luciobarbus, Cyprinidae)," Molecular Phylogenetics & Evolution, 18 (2001), 252-63.
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M. Goodman et al., "Evidence on human origins from haemoglobins of African apes," Nature, 303 (1983), 546-548.
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Colin Patterson, Evolution (Ithaca, N.Y.: Comstock Pub. Associates, 1999).
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T. Ohta, "Evolution by Gene Duplication and Compensatory Advantageous Mutations," Genetics, 120 (1988), 841-847.
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T. Ohta, "Evolution by nearly-neutral mutations," Genetica, 103 (1998), 83-90.
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T. Ohta, "Evolution of gene families," Gene, 259 (2000), 45-52.
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J. J. Doyle and B. S. Gaut, "Evolution of genes and taxa: a primer," Plant Molecular Biology, 42 (2000), 1-23.
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Y. Tateno, "Evolution of glutamine synthetase genes is in accordance with the neutral theory of molecular evolution," Japanese Journal of Genetics, 69 (1994), 489-502.
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Y. Tateno, "Evolution of Glutamine-Synthetase Genes Is in Accordance with the Neutral Theory of Molecular Evolution," Japanese Journal of Genetics, 69 (1994), 489-502.
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R. Kondo et al., "Evolution of hominoid mitochondrial DNA with special reference to the silent substitution rate over the genome," Journal of Molecular Evolution, 36 (1993), 517-31.
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R. Kondo et al., "Evolution of Hominoid Mitochondrial-DNA with Special Reference to the Silent Substitution Rate over the Genome," Journal of Molecular Evolution, 36 (1993), 517-531.
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T. Gojobori et al., "Evolution of Pathogenic Viruses with Special Reference to the Rates of Synonymous and Nonsynonymous Substitutions," Japanese Journal of Genetics, 69 (1994), 481-488.
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D. Graur and W. H. Li, "Evolution of protein inhibitors of serine proteinases: positive Darwinian selection or compositional effects?," Journal of Molecular Evolution, 28 (1988), 131-5.
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H. Tachida, "Evolution of repeated sequences in non-coding regions of the genome," Japanese Journal of Genetics, 68 (1993), 549-65.
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H. Tachida, "Evolution of Repeated Sequences in Noncoding Regions of the Genome," Japanese Journal of Genetics, 68 (1993), 549-565.
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L. Chao, "Evolution of sex and the molecular clock in RNA viruses," Gene, 205 (1997), 301-308.
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Robert J. Russell et al., Evolutionary and molecular biology: scientific perspectives on divine action (Vatican City State: Berkeley, Calif.: Vatican Observatory; Center for Theology and the Natural Sciences, 1998).
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