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Critical Points in Tumorigenesis: A Carcinogen-Initiated Phase Transition Analyzed via Single-Cell Proteomics

Poovathingal, Suresh Kumar and Kravchenko-Balasha, Nataly and Shin, Young Shik and Levine, Raphael David and Heath, James R. (2016) Critical Points in Tumorigenesis: A Carcinogen-Initiated Phase Transition Analyzed via Single-Cell Proteomics. Small, 12 (11). pp. 1425-1431. ISSN 1613-6810. PMCID PMC4886749. https://resolver.caltech.edu/CaltechAUTHORS:20160125-133909554

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Abstract

A kinetic, single-cell proteomic study of chemically induced carcinogenesis is interpreted by treating the single-cell data as fluctuations of an open system transitioning between different steady states. In analogy to a first-order transition, phase coexistence and the loss of degrees of freedom are observed. The transition is detected well before the appearance of the traditional biomarker of the carcinogenic transformation.


Item Type:Article
Related URLs:
URLURL TypeDescription
http://dx.doi.org/10.1002/smll.201501178DOIArticle
http://onlinelibrary.wiley.com/doi/10.1002/smll.201501178/abstractPublisherArticle
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4886749/PubMed CentralArticle
ORCID:
AuthorORCID
Heath, James R.0000-0001-5356-4385
Additional Information:© 2016 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim. Received: April 27, 2015; Revised: November 9, 2015; First published: 18 January 2016. S.K.P. and N.K.-B. contributed equally to this work. S.K.P. and J.R.H. conceived and designed the project. S.K.P. planned and carried out the research. N.K.B. and R.D.L. developed the theory. N.K.B. performed the theoretical analysis with inputs from other authors. Y.S.S. contributed to reagent/analysis tools. S.K.P., N.K.B., R.D.L. and J.R.H., were involved in discussion of results and in preparing the manuscript. The authors are grateful to Rudi Balling, Alexander Skupin and Yaron Antebi for their detailed and insightful discussion and comments on the contents of the manuscript. This work is funded by the National Cancer Institute through grant 5U54 CA119347, the Jean Perkins Foundation, the Ben and Catherine Ivy Foundation, and an Intermobility grant Sinc-Prot; 2013 from Fonds National de la Recherche Luxembourg, Grand Duchy of Luxembourg.
Funders:
Funding AgencyGrant Number
National Cancer Institute5U54 CA119347
Jean Perkins FoundationUNSPECIFIED
Ben and Catherine Ivy FoundationUNSPECIFIED
Fonds National de la Recherche LuxembourgSinc-Prot; 2013
Issue or Number:11
PubMed Central ID:PMC4886749
Record Number:CaltechAUTHORS:20160125-133909554
Persistent URL:https://resolver.caltech.edu/CaltechAUTHORS:20160125-133909554
Official Citation:Poovathingal, S. K., Kravchenko-Balasha, N., Shin, Y. S., Levine, R. D. and Heath, J. R. (2016), Critical Points in Tumorigenesis: A Carcinogen-Initiated Phase Transition Analyzed via Single-Cell Proteomics. Small, 12: 1425–1431. doi:10.1002/smll.201501178
Usage Policy:No commercial reproduction, distribution, display or performance rights in this work are provided.
ID Code:63933
Collection:CaltechAUTHORS
Deposited By: Tony Diaz
Deposited On:25 Jan 2016 22:26
Last Modified:03 Oct 2019 09:33

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