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Analysis of repeating DNA sequences by reassociation

Britten, Roy J. and Graham, Dale E. and Neufeld, Berney R. (1974) Analysis of repeating DNA sequences by reassociation. In: Nucleic Acids and Protein Synthesis Part E. Methods in Enzymology. No.29. Academic Press , San Diego, CA, pp. 363-418. ISBN 978-0-12-181892-0. https://resolver.caltech.edu/CaltechAUTHORS:20160414-121636778

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Abstract

Repetitive DNA occurs widely, if not universally, among higher organisms. A variety of procedures has been developed or adapted to examine its characteristics and a body of concepts and language has grown up to deal with its complexities. This chapter attempts to summarize this body of knowledge and technique. Owing to human frailty and the real problems of the subject, it tends to emphasize the approaches and conceptual position. The chapter describes techniques for the analysis of repeating DNA sequences by reassociation and a method for the evaluation of rate constants. The purity of the DNA's used in reassociation is critical, as the presence of contaminating proteins and metal ions can markedly alter reassociation results and reproducibility. Metal ions can be removed from DNA by passing it over Chelex 100 (Bio-Rad Labs) that has been neutralized and equilibrated with buffer.


Item Type:Book Section
Related URLs:
URLURL TypeDescription
http://dx.doi.org/10.1016/0076-6879(74)29033-5DOIArticle
http://www.sciencedirect.com/science/article/pii/0076687974290335PublisherArticle
Additional Information:© 1974 Academic Press. Much of this work was done at the Department of Terrestrial Magnetism of the Carnegie Institution of Washington, and the latter parts were done at the California Institute of Technology and were supported by U.S. Public Health Service Grant No. HD05753 and National Science Foundation Grant No. GB-33441x. D.E.G. was supported by a Damon Runyon Post-Doctoral Fellowship. B.R.N. was supported by the National Institute of Health. The realization of the hydroxyapatite technique for this purpose was the work of D. E. Kohne, and he has contributed at all levels to the study of renaturation kinetics and its implications.
Funders:
Funding AgencyGrant Number
NIHHD-05753
NSFGB-33441X
Damon Runyon Cancer Research FoundationUNSPECIFIED
Series Name:Methods in Enzymology
Issue or Number:29
Record Number:CaltechAUTHORS:20160414-121636778
Persistent URL:https://resolver.caltech.edu/CaltechAUTHORS:20160414-121636778
Official Citation:Roy J. Britten, Dale E. Graham, Berney R. Neufeld, [29] Analysis of repeating DNA sequences by reassociation, Methods in Enzymology, Academic Press, 1974, Volume 29, Pages 363-418, ISSN 0076-6879, ISBN 9780121818920, http://dx.doi.org/10.1016/0076-6879(74)29033-5. (http://www.sciencedirect.com/science/article/pii/0076687974290335)
Usage Policy:No commercial reproduction, distribution, display or performance rights in this work are provided.
ID Code:66170
Collection:CaltechAUTHORS
Deposited By: George Porter
Deposited On:18 Apr 2016 16:20
Last Modified:03 Oct 2019 09:54

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