Published May 15, 1998 | Version public
Journal Article

A comparison of H-pin and hairpin polyamide motifs for the recognition of the minor groove of DNA

Abstract

Solid-phase polyamide synthesis is extended to the H-pin motif using a Boc-protected bispyrrole monomer and bidirectional synthesis. Sequence-specific recognition of a designated seven base pair target site is achieved by the formation of a 10-ring H-pin polyamide⋅DNA complex in the minor groove. DNA binding properties are compared with the corresponding hairpin polyamides (see below).

Additional Information

© 1998 Wiley-VCH Verlag GmbH. Received: November 20, 1997; First published: 15 May 1998. We are grateful to the National Institutes of Health (GM-27681) for support of the research and a research traineeship award (GM-08501) for W.A.G., to the Ralph M. Parsons Foundation for a predoctoral fellowship to W.A.G., and to the Howard Hughes Medical Institute for a predoctoral fellowship to E.E.B.

Additional details

Identifiers

Eprint ID
66864
DOI
10.1002/(SICI)1521-3765(19980515)4:5<796::AID-CHEM796>3.0.CO;2-G
Resolver ID
CaltechAUTHORS:20160510-094021673

Funding

NIH
GM-27681
NIH Predoctoral Fellowship
GM-08501
Ralph M. Parsons Foundation
Howard Hughes Medical Institute (HHMI)

Dates

Created
2016-05-18
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Updated
2021-11-11
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