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Eradicating mass spectrometric glycan rearrangement by utilizing free radicals

Desai, Nikunj and Thomas, Daniel A. and Lee, Jungeun and Gao, Jinshan and Beauchamp, J. L. (2016) Eradicating mass spectrometric glycan rearrangement by utilizing free radicals. Chemical Science, 7 (8). pp. 5390-5397. ISSN 2041-6520. PMCID PMC6020757. doi:10.1039/C6SC01371F. https://resolver.caltech.edu/CaltechAUTHORS:20160729-115108854

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Abstract

Mass spectrometric glycan rearrangement is problematic because it provides misleading structural information. Here we report on a new reagent, a methylated free radical activated glycan sequencing reagent (Me-FRAGS), which combines a free radical precursor with a methylated pyridine moiety that can be coupled to the reducing terminus of glycans. The collisional activation of Me-FRAGS-derivatized glycans generates a nascent free radical that concurrently induces abundant glycosidic bond and cross-ring cleavage without the need for subsequent activation. The product ions resulting from glycan rearrangement, including internal residue loss and multiple external residue losses, are precluded. Glycan structures can be easily assembled and visualized using a radical driven glycan deconstruction diagram (R-DECON diagram). The presence and location of N-acetylated saccharide units and branch sites can be identified from the characteristic dissociation patterns observed only at these locations. The mechanisms of dissociation are investigated and discussed. This Me-FRAGS based mass spectrometric approach creates a new blueprint for glycan structure analysis.


Item Type:Article
Related URLs:
URLURL TypeDescription
http://dx.doi.org/10.1039/C6SC01371FDOIArticle
http://www.rsc.org/suppdata/c6/sc/c6sc01371f/c6sc01371f1.pdfPublisherSupplementary Information
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6020757PubMed CentralArticle
ORCID:
AuthorORCID
Thomas, Daniel A.0000-0001-9415-5991
Gao, Jinshan0000-0001-9363-785X
Beauchamp, J. L.0000-0001-8839-4822
Additional Information:© 2016 Royal Society of Chemistry. This article is licensed under a Creative Commons Attribution 3.0 Unported Licence. Received 28th March 2016. Accepted 4th May 2016. First published online 05 May 2016. This work was supported by the Montclair State University and Beckman Institute at the California Institute of Technology.
Funders:
Funding AgencyGrant Number
Montclair State UniversityUNSPECIFIED
Caltech Beckman InstituteUNSPECIFIED
Issue or Number:8
PubMed Central ID:PMC6020757
DOI:10.1039/C6SC01371F
Record Number:CaltechAUTHORS:20160729-115108854
Persistent URL:https://resolver.caltech.edu/CaltechAUTHORS:20160729-115108854
Official Citation:Eradicating mass spectrometric glycan rearrangement by utilizing free radicals Nikunj Desai, Daniel A. Thomas, Jungeun Lee, Jinshan Gao and J. L. Beauchamp Chem. Sci., 2016, 7, 5390-5397 DOI: 10.1039/C6SC01371F
Usage Policy:No commercial reproduction, distribution, display or performance rights in this work are provided.
ID Code:69312
Collection:CaltechAUTHORS
Deposited By:INVALID USER
Deposited On:29 Jul 2016 19:13
Last Modified:28 Apr 2022 17:14

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