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Fully automatic colon segmentation in computed tomography colonography

Zhang, Weidong and Kim, Hyun Min (2016) Fully automatic colon segmentation in computed tomography colonography. In: IEEE International Conference on Signal and Image Processing (ICSIP). IEEE , Piscataway, NJ, pp. 51-55. ISBN 978-1-5090-2377-6. http://resolver.caltech.edu/CaltechAUTHORS:20170405-150857672

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Abstract

Colon cancer is the second leading cause of cancer-related death in the United States, and can be prevented by the removal of precancerous colon polyps. For colon diagnosis, computed tomography colonography (CTC) has been proposed as a minimally invasive technique, and computer aided diagnosis (CAD) systems using CTC data are a rapidly evolving tool to localize, detect, and identify colon polyps. Colon segmentation is an essential and challenging step in the development of CAD systems. To accurately segment the whole colon using CTC data, we propose a fully automatic method. In this work, the whole body region excluding the lungs is first localized to narrow the search region and lower computation burden. Inside the body of the test case, a pre-trained colon atlas probability map is fitted using anatomy constraints to localize parts of the colon as seeded regions. Then, region growing is applied to generate an initial 3D segmentation. Below colon air, discriminative classifiers are used to classify regions into colon-tagged materials or non-colon regions, and a fuzzy connectedness segmentation method is applied. Combining colon air and tagged residuals, the whole colon is extracted from CTC data. Experiments were conducted on publicly available CTC database which results in better accuracy and error rate compared with other methods.


Item Type:Book Section
Related URLs:
URLURL TypeDescription
http://dx.doi.org/10.1109/SIPROCESS.2016.7888222DOIArticle
http://ieeexplore.ieee.org/document/7888222/PublisherArticle
Additional Information:© 2016 IEEE.
Subject Keywords:colon segmentation, probabilistic atlas map, learning-based classification, CTC
Record Number:CaltechAUTHORS:20170405-150857672
Persistent URL:http://resolver.caltech.edu/CaltechAUTHORS:20170405-150857672
Official Citation:W. Zhang and H. M. Kim, "Fully automatic colon segmentation in computed tomography colonography," 2016 IEEE International Conference on Signal and Image Processing (ICSIP), Beijing, China, 2016, pp. 51-55. doi: 10.1109/SIPROCESS.2016.7888222
Usage Policy:No commercial reproduction, distribution, display or performance rights in this work are provided.
ID Code:75748
Collection:CaltechAUTHORS
Deposited By: Kristin Buxton
Deposited On:05 Apr 2017 23:01
Last Modified:05 Apr 2017 23:01

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