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Digital Holographic Microscopy, a Method for Detection of Microorganisms in Plume Samples from Enceladus and Other Icy Worlds

Bedrossian, Manuel and Lindensmith, Chris and Nadeau, Jay (2017) Digital Holographic Microscopy, a Method for Detection of Microorganisms in Plume Samples from Enceladus and Other Icy Worlds. Astrobiology, 17 (9). pp. 913-925. ISSN 1557-8070. doi:10.1089/ast.2016.1616.

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Detection of extant microbial life on Earth and elsewhere in the Solar System requires the ability to identify and enumerate micrometer-scale, essentially featureless cells. On Earth, bacteria are usually enumerated by culture plating or epifluorescence microscopy. Culture plates require long incubation times and can only count culturable strains, and epifluorescence microscopy requires extensive staining and concentration of the sample and instrumentation that is not readily miniaturized for space. Digital holographic microscopy (DHM) represents an alternative technique with no moving parts and higher throughput than traditional microscopy, making it potentially useful in space for detection of extant microorganisms provided that sufficient numbers of cells can be collected. Because sample collection is expected to be the limiting factor for space missions, especially to outer planets, it is important to quantify the limits of detection of any proposed technique for extant life detection. Here we use both laboratory and field samples to measure the limits of detection of an off-axis digital holographic microscope (DHM). A statistical model is used to estimate any instrument's probability of detection at various bacterial concentrations based on the optical performance characteristics of the instrument, as well as estimate the confidence interval of detection. This statistical model agrees well with the limit of detection of 10^3 cells/mL that was found experimentally with laboratory samples. In environmental samples, active cells were immediately evident at concentrations of 104 cells/mL. Published estimates of cell densities for Enceladus plumes yield up to 104 cells/mL, which are well within the off-axis DHM's limits of detection to confidence intervals greater than or equal to 95%, assuming sufficient sample volumes can be collected. The quantitative phase imaging provided by DHM allowed minerals to be distinguished from cells. Off-axis DHM's ability for rapid low-level bacterial detection and counting shows its viability as a technique for detection of extant microbial life provided that the cells can be captured intact and delivered to the sample chamber in a sufficient volume of liquid for imaging.

Item Type:Article
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Nadeau, Jay0000-0001-5258-0076
Additional Information:© 2017 Manuel Bedrossian et al.; Published by Mary Ann Liebert, Inc. This Open Access article is distributed under the terms of the Creative Commons License (, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. Submitted 2 November 2016. Accepted 6 February 2017. Online Ahead of Print: July 14, 2017.
Subject Keywords:In situ life detection—Extant microorganisms—Holographic microscopy—Ocean Worlds—Enceladus—Imaging
Issue or Number:9
Record Number:CaltechAUTHORS:20170707-104246206
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Official Citation:Bedrossian Manuel, Lindensmith Chris, and Nadeau Jay L.. Astrobiology. September 2017, 17(9): 913-925.
Usage Policy:No commercial reproduction, distribution, display or performance rights in this work are provided.
ID Code:78851
Deposited By: George Porter
Deposited On:20 Jul 2017 18:37
Last Modified:15 Nov 2021 17:43

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