Atmos. Chem. Phys., 16, 8479–8498, 2016
www.atmos-chem-phys.net/16/8479/2016/
doi:10.5194/acp-16-8479-2016
© Author(s) 2016. CC Attribution 3.0 License.
Differential column measurements using compact
solar-tracking spectrometers
Jia Chen
1,a
, Camille Viatte
2
, Jacob K. Hedelius
2
, Taylor Jones
1
, Jonathan E. Franklin
1
, Harrison Parker
3
, Elaine
W. Gottlieb
1
, Paul O. Wennberg
2
, Manvendra K. Dubey
3
, and Steven C. Wofsy
1
1
School of Engineering and Applied Sciences and Department of Earth and Planetary Sciences, Harvard University,
Cambridge, MA 02138, USA
2
Division of Geological and Planetary Sciences, California Institute of Technology, Pasadena, CA 91125, USA
3
Earth and Environmental Sciences, Los Alamos National Laboratory, Los Alamos, NM 87545, USA
a
now at: Electrical and Computer Engineering, Technische Universität München, Munich, 80333, Germany
Correspondence to:
Jia Chen (jia.chen@tum.de)
Received: 29 December 2015 – Published in Atmos. Chem. Phys. Discuss.: 17 February 2016
Revised: 6 June 2016 – Accepted: 8 June 2016 – Published: 12 July 2016
Abstract.
We demonstrate the use of compact solar-tracking
Fourier transform spectrometers (Bruker EM27/SUN) for
differential measurements of the column-averaged dry-air
mole fractions of CH
4
and CO
2
within urban areas. Using
Allan variance analysis, we show that the differential column
measurement has a precision of 0.01 % for
X
CO
2
and
X
CH
4
with an optimum integration time of 10 min, corresponding
to Allan deviations of 0.04 ppm and 0.2 ppb, respectively.
The sensor system is very stable over time and after relo-
cation across the continent. We report tests of the differential
column measurement, and its sensitivity to emission sources,
by measuring the downwind-minus-upwind column differ-
ence
1X
CH
4
across dairy farms in the Chino area, Califor-
nia, and using the data to verify emissions reported in the lit-
erature. Ratios of spatial column differences
1X
CH
4
/1X
CO
2
were observed across Pasadena within the Los Angeles basin,
indicating values consistent with regional emission ratios
from the literature. Our precise, rapid measurements allow us
to determine significant short-term variations (5–10 min) of
X
CO
2
and
X
CH
4
and to show that they represent atmospheric
phenomena.
Overall, this study helps establish a range of new applica-
tions for compact solar-viewing Fourier transform spectrom-
eters. By accurately measuring the small differences in in-
tegrated column amounts across local and regional sources,
we directly observe the mass loading of the atmosphere due
to the influence of emissions in the intervening locale. The
inference of the source strength is much more direct than in-
version modeling using only surface concentrations and less
subject to errors associated with small-scale transport phe-
nomena.
1 Introduction
Cities and their surrounding urban regions occupy less than
3 % of the global land surface (Grimm et al., 2008) but are
home to 54 % of the world population (WHO, 2014) and ac-
count for more than 70 % of global fossil-fuel CO
2
emissions
(Gurney et al., 2015). Hence, accurate methods for measur-
ing urban- and regional-scale carbon fluxes are required in
order to design and implement policies for emission reduc-
tion initiatives.
It is challenging to use in situ measurements of CO
2
and
CH
4
to derive emission fluxes in urban regions. Surface con-
centrations typically have high variance due to the influ-
ence of nearby sources, and they are strongly modulated by
mesoscale transport phenomena that are difficult to simu-
late in atmospheric models. These include the variation of
the depth of the planetary boundary layer (PBL), sea breeze,
topographic flows, etc. (McKain et al., 2012; Bréon et al.,
2015).
The mass loading of the atmosphere can be directly de-
termined by measuring the column-integrated amount of a
tracer through the whole atmosphere. Column measurements
are insensitive to vertical redistribution of tracer mass, e.g.,
Published by Copernicus Publications on behalf of the European Geosciences Union.
8480
J. Chen et al.: Differential column measurements using compact solar-tracking spectrometers
due to growth of the PBL, and are also less influenced by
nearby point sources whose emissions are concentrated in a
thin layer near the surface. Column observations are more
compatible with the scale of atmospheric models and hence
provide stronger constraints for inverse modeling (Linden-
maier et al., 2014).
One potential drawback, however, is that column obser-
vations are sensitive to surface emissions over a very wide
range of spatial scales, spanning nearby emissions and all
those upwind in the urban, continental, and hemispheric do-
mains. In this paper we demonstrate how to use simultaneous
measurements of the column-averaged dry-air mole fractions
(DMFs) of CH
4
and CO
2
(denoted by
X
CH
4
and
X
CO
2
, re-
spectively) at upwind and downwind sites to mitigate this
limitation. The horizontal gradients
within
a region are rel-
atively insensitive to surface fluxes upwind of the domain,
providing favorable input for regional flux inversions.
We use three matched, compact Fourier transform spec-
trometers (FTSs) to measure the small (0.1 %) differences of
X
CH
4
and
X
CO
2
, and we demonstrate sufficient precision and
speed to determine emission rates at the urban scale. By di-
rectly measuring spatial and temporal gradients of the mass
loading, we reduce the sensitivity of inverse model results to
atmospheric fine structure, such as may arise from vertical
redistribution of trace gases, and that often complicates the
interpretation of surface in situ data (Chang et al., 2014).
Our ground-based network of spectrometers measuring
gradients of column amounts could enable new approaches
to validate the urban–rural gradients of satellite observations
such as OCO-2 (Crisp et al., 2008; Frankenberg et al., 2015)
and TROPOMI (Veefkind et al., 2012). In contrast to the
large, high-spectral-resolution instruments of the Total Car-
bon Column Observing Network (TCCON), which are not
easily relocated, the compact spectrometers can be deployed
directly under satellite tracks that pass near major cities to
assess potential artifacts in satellite-derived tracer gradients
that might arise from urban-rural differences in aerosol bur-
den, land surface properties, etc.
Several recent papers have studied column-averaged con-
centrations of trace gases to derive source fluxes. Wunch
et al. (2009) observed diurnal patterns for
X
CO
2
,
X
CH
4
, and
X
CO
over Los Angeles, similar to the model simulations of
McKain et al. (2012) for Salt Lake City. Kort et al. (2012)
used GOSAT satellite data to measure the difference between
CO
2
columns inside and outside Los Angeles and to derive a
top-down inventory for CO
2
. Papers by Stremme et al. (2009,
2013) and Té et al. (2012) used total column measurements
from a ground-based FTS to estimate and monitor CO emis-
sion in Mexico City and Paris, respectively. Mellqvist et al.
(2010) studied plumes from industrial complexes, and Lin-
denmaier et al. (2014) examined plumes from two power
plants and discriminated them. Kort et al. (2014) quantified
large methane sources missing in inventories at Four Corners,
New Mexico. However, these studies did not have simulta-
neous upwind and downwind column data, one of the novel
elements of the present paper.
Frey et al. (2015) and Hase et al. (2015) reported de-
ployments of multiple FTSs of the same type as employed
here, deriving calibration and stability characteristics in a
field setting. We extend this analysis by determining the Al-
lan variances of column concentration differences between
spectrometer pairs deployed side-by-side, providing a rigor-
ous assessment of the precision of the differential column
measurements.
Here we study local-scale gradients in
X
CO
2
and
X
CH
4
in
two applications. First, we deployed our spectrometers up-
wind and downwind of the dairy farms in Chino, Califor-
nia (about 50 km
2
area), and use the data to compare with
emissions reported in the literature. A second application
uses the observed ratio of differences in
X
CO
2
and
X
CH
4
,
i.e.,
1X
CH
4
/1X
CO
2
, to characterize emission ratios for these
gases within the Los Angeles basin.
In another application of the compact spectrometers, we
co-located spectrometers to demonstrate measurement of
short-term (5–10 min) variations of column-averaged DMFs
in the atmosphere. The high-precision measurements with
rapid scan rates are an advantage of the compact spectrome-
ters compared to larger, higher-spectral-resolution spectrom-
eters that have scan durations in the minute range. We show
that high-frequency observations can be used to quantify the
influence of sporadic events, such as plumes, transient peaks,
or instabilities across the top of the mixed layer (ML), on
measurements in urban areas.
2 Differential column network
2.1 Column measurement and existing FTS network
Solar-tracking FTSs can be used to measure the gas col-
umn number densities, i.e., the number of gas molecules
per unit area in the atmospheric column (column
G
, unit:
molec. m
−
2
). The sun is used as light source and the FTS is
located on the ground for measuring the solar radiation trans-
mitted through the atmosphere. The recorded sun radiation
spectrum is broadband and covers the absorption fingerprints
of diverse gas species including CO
2
, CH
4
, H
2
O, and O
2
.
The attenuation of the solar intensity at specific frequencies
provides a measure for the column number density of various
gases. For further details of modeling the atmospheric trans-
mittance spectrum, please see Wunch et al. (2011) and Hase
et al. (2004); for the working principles of FTS please refer
to Davis et al. (2001) and Griffiths and De Haseth (2007).
The existing FTS networks include NDACC (Network for
the Detection of Atmospheric Composition Change; Hanni-
gan, 2011) and TCCON (Toon et al., 2009; Wunch et al.,
2010, 2011). NDACC measures at mid-infrared wavelengths
and detects atmospheric O
3
, HNO
3
, HCl, HF, CO, N
2
O,
CH
4
, HCN, C
2
H
6
, and ClONO
2
, chosen to help understand
Atmos. Chem. Phys., 16, 8479–8498, 2016
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J. Chen et al.: Differential column measurements using compact solar-tracking spectrometers
8481
the physical and chemical state of the upper troposphere and
the stratosphere. The TCCON network focuses on column
measurements of greenhouse gases, mainly CO
2
, CH
4
, N
2
O,
and CO, at near-infrared wavelengths. It uses the Bruker IFS
125HR spectrometer that is large in dimension (container
size) and heavyweight (
>
500 kg; Bruker, 2006). The spectra
in the TCCON network are recorded with a spectral resolu-
tion of approx. 0.02 cm
−
1
and require about 170 s for one
forward/backward scan pair (Hedelius et al., 2016).
2.2 Differential column measurement with compact
FTS
Our differential column network uses at least two spectrom-
eters to make simultaneous measurements of column num-
ber densities of CO
2
, CH
4
, and O
2
. We then compute the
column-averaged DMFs (Wunch et al., 2011) for each gas
G, i.e.,
X
G
=
column
G
column
O
2
·
0
.
2095
,
(1)
and differences, i.e.,
1X
G
=
X
d
G
−
X
u
G
,
(2)
where
X
d
G
and
X
u
G
stand for column-averaged DMFs at
downwind and upwind sites.
Our sensors are two EM27/SUN FTS units owned by
Harvard University and one owned by Los Alamos Na-
tional Laboratory: nos. 45, 46, and 34 Bruker Optics (des-
ignated ha, hb, and pl, respectively). They are compact
(62.5 cm
×
35.6 cm
×
47.3 cm) and lightweight (22.8 kg in-
cluding the sun tracker), with a spectral resolution of
0.5 cm
−
1
and a scan time of 5.8 s (forward or backward
scan). The EM27/SUN tracks the sun precisely (1
σ
: 11 arc-
sec) using a camera for fine alignment of the tracking mirrors
(Gisi et al., 2011). It is mechanically very robust, with excel-
lent precision in retrieving
X
CO
2
and
X
CH
4
(Gisi et al., 2012;
Klappenbach et al., 2015; Hedelius et al., 2016), comparable
to Bruker IFS 125HR used in the TCCON network (Wunch
et al., 2011).
We carried out extensive side-by-side measurements of ha
and hb in Cambridge, Massachusetts and Pasadena, Califor-
nia, over many months, thoroughly examining precision and
robustness, and also compared these spectrometers to the
TCCON spectrometer in Pasadena (Hedelius et al., 2016).
We confirm that these spectrometers are stable (Frey et al.,
2015). We show that comparing pairs of them cancels out
most of the systematic error and bias from diverse sources,
e.g., spectroscopic and retrieval errors, instrument bias, and
errors in pressure and temperature, enabling us to determine
0.1 % differences in column-averaged DMFs across the net-
work.
3 System characterization
3.1 Allan analysis for system precision
Known standards cannot be exchanged for the ambient air
in a total column measurement; hence it is difficult to as-
sess the precision of atmospheric measurements end to end.
Two commonly used literature methods for precision esti-
mates are as follows.
–
The first method is based on measurements of the stan-
dard deviation of the DMF time series, with the trend re-
moved subtracting a moving average (Gisi et al., 2012).
This approach is confounded by real variations in the
atmosphere that occur on short timescales (vide infra).
–
The second method is based on the residual of the
spectral fit. The estimate obtained by this method does
not separate systematic errors, e.g., errors in spectro-
scopic database and modeling of instrument line shape
(ILS), from the measurement noise, and therefore this
approach may overestimate the true random uncertainty
of the measurement (cf. Fu et al., 2014).
In this paper we use the Allan variance method (Allan,
1966; Werle et al., 1993) to estimate the measurement preci-
sion. Figure 1 shows the Allan deviations of the differences
in column-averaged DMFs measured simultaneously by ha
and hb at the same location, i.e,
1X
G
(t)
=
X
hb
G
(t)
−
X
ha
G
(t)
.
The Allan variance of
1X
G
is denoted by
σ
2
allan
,1X
G
, which
is the expectation value
〈〉
of the difference between adjacent
samples averaged over the time period
τ
:
σ
2
allan
,1X
G
(τ)
=
1
2
〈
(
1X
G,n
+
1
−
1X
G,n
)
2
〉
,
(3)
with
1X
G,n
=
1
τ
t
n
+
τ
∫
t
n
1X
G
(t)
d
t.
Practically,
1X
G,n
is the mean of all
1X
G
measurements
within the time interval
[
t
n
,t
n
+
τ)
.
According to the Allan deviation plots (Fig. 1), we made
the following findings.
–
The optimal integration time, given by the minimum in
the Allan deviation, is 10 to 20 min, for both
X
CO
2
and
X
CH
4
.
–
When averaging 10 min, the precision (1 Allan devia-
tion) of the EM27/SUN differential column measure-
ment is 0.04–0.05 ppm (0.01 %) for
X
CO
2
and 0.1–
0.2 ppb (0.01 %) for
X
CH
4
. Since the two instruments
are statistically uncorrelated, the individual measure-
ment noise is smaller by factor 1
/
√
2, indicating preci-
sion comparable to near-infrared in situ laser spectrom-
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8482
J. Chen et al.: Differential column measurements using compact solar-tracking spectrometers
-1/2
f
0
1/2
f
-2
-1/2
f
0
Figure 1.
Allan deviations
σ
allan
,1X
CO2
and
σ
allan
,1X
CH4
as a function of the integrating time
τ
. The black dashed lines represent a slope
of
−
1
/
2 and a slope of 1
/
2, which correspond to power spectral densities
S(f)
=
f
0
(white noise) and
S(f)
=
f
−
2
(Brownian noise),
respectively. The Allan deviation follows a slope of
−
1
/
2 up to an integration time of 10 to 20 min, then stays constant (
S(f)
=
f
−
1
), and
subsequently turns over to a slope of 1
/
2, which describes a drift.
eters with commensurate optical path length and inte-
gration time (Picarro, 2015a, b). Note that these pre-
cision estimates represent the full end-to-end process-
ing of the observations, including deriving the spectrum
from the interferogram, retrieving the column num-
ber densities in the atmosphere, and normalizing with
the O
2
column amount to obtain the column-averaged
DMFs.
–
When integrating less than 10 min, the Allan deviation
follows a slope of
−
1
/
2 in the double logarithmic scale,
indicating white noise (
τ
−
1
/
2
→
f
0
) that has a constant
power spectral density over the frequency
f
. As the av-
eraging time
τ
increases beyond 10 min, the Allan devi-
ation rises a little, showing a small color noise compo-
nent (
τ
1
/
2
→
f
−
2
), which arises from instrument drift,
in part due to temperature differences inside of the spec-
trometers. There is also a small divergence between the
measurements of ha and hb at high solar zenith an-
gles, traceable to their slightly different ILSs. The mea-
sured ILS parameters are given in Appendix A. Mi-
croscale eddies have durations of 10 s to 10 min and
length scales from tens to hundreds of meters (Stull,
1988, Fig. 2.2). Therefore atmospheric turbulence prob-
ably does not play a major role in the Allan plot because
there is little color noise within timescale
≤
10 min for
two spectrometers looking along atmospheric paths sep-
arated by roughly one meter.
We use a shorter integration time (5 min) for measuring
emissions from local- and regional-scale sources (Sects. 4.1
and 4.2), in order to retain high-frequency atmospheric sig-
nals, giving us precision of 0.05–0.06 ppm for
1X
CO
2
and
0.2–0.3 ppb for
1X
CH
4
(see Fig. 1). To study the short-term
variations due to pollution plumes or turbulent eddies we use
2 min integration time (Sect. 4.3).
3.2 System stability
Differential column observations by two spectrometers will
inevitably have bias in addition to fluctuations and drift. For
the EM27/SUN, small differences in the alignments of the
interferometers result in minute, but observable and system-
atic, deviations in the retrieval results. We examined the bi-
ases between ha and hb over a long period of time to de-
termine whether these errors can be effectively corrected by
applying a constant calibration factor to the retrieval of one
instrument to match the performance of the other. The cali-
bration factors are determined assuming a linear model, i.e.,
X
hb
G
=
X
ha
G
·
R
G
, and for each gas individually.
The value of
R
G
was consistent over time for the two
Harvard EM27/SUNs, including shipment across the con-
tiguous United States (Fig. 2, Table 1). We used two re-
trieval software systems, I2S (interferogram-to-spectrum)
combined with GFIT nonlinear least-squares spectral fitting
retrieval software (Wunch et al., 2015; Hedelius et al., 2016),
and PROFFIT (Hase et al., 2004). The calibration factors are
slightly different for GFIT and PROFFIT, traceable to their
specific modeling of the ILS, various a priori volume mix-
ing ratio profiles, and unequal spectral microwindows that
are used. Nevertheless,
R
G
is consistent in Cambridge and
Pasadena, before and during the campaign, when the same
retrieval settings are used. Retrievals for ha have been scaled
with
R
G
for the Allan analysis (Sect. 3.1) and for the scien-
tific applications (Sect. 4) below. Calibration factors for pl
are shown in Appendix B. The measured ILS parameters of
the two Harvard EM27/SUNs are also consistent over time
and across continent, as given in Appendix A.
Atmos. Chem. Phys., 16, 8479–8498, 2016
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