Photoacoustic tomography of small animal brain with a
curved array transducer
Xinmai Yang
Washington University in St. Louis
Department of Biomedical Engineering
Optical Imaging Laboratory
St. Louis, Missouri 63130
Anastasios Maurudis
John Gamelin
Andres Aguirre
Quing Zhu
University of Connecticut
Department of Electrical Engineering
Storrs, Connecticut 06269
Lihong V. Wang
Washington University in St. Louis
Department of Biomedical Engineering
Optical Imaging Laboratory
St. Louis, Missouri 63130
Abstract.
We present the application of a curved array photoacoustic
tomographic imaging system that can provide rapid, high-resolution
photoacoustic imaging of small animal brains. The system is opti-
mized to produce a B-mode,
90-deg
field-of-view image at
sub-
200-
m
resolution at a frame rate of
1 frame/second
when a
10-Hz
pulse repetition rate laser is employed. By rotating samples, a
complete
360-deg
scan can be achieved within
15 s
. In previous
work, two-dimensional
2-D
ex vivo
mouse brain cortex imaging has
been reported. We report three-dimensional
3-D
small animal brain
imaging obtained with the curved array system. The results are pre-
sented as a series of 2-D cross-sectional images. Besides structural
imaging, the blood oxygen saturation of the animal brain cortex is
also measured
in vivo
. In addition, the system can measure the time-
resolved relative changes in blood oxygen saturation level in the small
animal brain cortex. Last, ultrasonic gel coupling, instead of the pre-
viously adopted water coupling, is conveniently used in near-real-
time 2-D imaging.
©
2009 Society of Photo-Optical Instrumentation Engineers.
DOI: 10.1117/1.3227035
Keywords: photoacoustics; imaging; imaging systems
.
Paper 08423R received Dec. 2, 2008; revised manuscript received Jun. 26, 2009;
accepted for publication Jul. 14, 2009; published online Sep. 16, 2009.
1 Introduction
In recent years, photoacoustic imaging
PAI, also referred to
as optoacoustic or thermoacoustic imaging
has emerged as a
promising novel biomedical imaging modality.
1
–
5
As a hybrid
imaging modality, PAI can provide ultrasound-resolution im-
ages with intrinsic optical contrast in regions up to
5cm
deep.
6
,
7
Besides structural information, PAI can also detect
functional changes and disorders
in vivo
8
,
9
since these changes
and disorders usually induce local optical contrast through
changing blood volume and oxygenation. Therefore, PAI rep-
resents a novel technology from the perspectives of both ul-
trasound and optical imaging: it adds new contrast and func-
tional information to ultrasound imaging, and it greatly
extends the depth of high-resolution optical imaging.
In the past decade, as small animal models have been es-
tablished for many human diseases,
in vivo
small animal im-
aging techniques have developed dramatically. PAI has at-
tracted much attention in this area due to the aforementioned
merits.
In
particular,
reconstruction-based
PAI—
photoacoustic tomography
PAT
—has been successfully ap-
plied to small animal brain imaging, and its applications in
structural, functional, and molecular imaging have been
demonstrated.
8
–
10
Frequently, PAT involves the scanning of a single ultra-
sound detector. The use of a single detector is inexpensive and
can provide a good signal-to-noise ratio
SNR
for an image;
however, the data acquisition duration is long, usually
20 min
per cross section. The prolonged measurement time
presents great challenges for the control of small animal
physiological parameters, especially when time-resolved
functional information is desired or multiple slices of cross-
section images are needed. Therefore, real-time or near real-
time PAT scans are necessary, which may be realized by using
array transducers.
The use of ultrasound array transducers for PAT has been
explored by several groups.
11
–
18
In these studies, linear or
curved array transducers were employed to reduce data acqui-
sition time and meet clinical needs. However, these systems
are neither designed nor optimized for small animal use. We
have developed a curved array photoacoustic system opti-
mized for high-resolution tomography of small animal
brains.
19
The array was custom fabricated by Imasonic, Inc.
Besançon, France
, using piezocomposite technology for
high sensitivity and SNR. The system employs 128-element
ultrasonic transducers operating at
5 MHz
with 80% band-
width for resolution of fine features such as brain vascula-
tures, while retaining high sensitivity for deep imaging. To
mimic the scanning of a single element transducer, all the
elements are arranged to form a quarter circle of
25 mm
ra-
dius; therefore, it takes three rotations to get the
360-deg
view data. Each individual element has an elevation height of
10 mm
with an azimuthal pitch of one wavelength
0.308 mm
and a kerf of
0.1 mm
. Furthermore, each ele-
ment is cylindrically focused with a focal distance of
19 mm
.
1083-3668/2009/14
5
/054007/5/$25.00 © 2009 SPIE
Address all correspondence to: Lihong Wang, Washington University in St.
Louis, Department of Biomedical Engineering, Optical Imaging Laboratory, St.
Louis, MO 63130. Tel:
314
935-6152; Fax:
314
935-7448; E-mail:
lhwang@biomed.wustl.edu
Journal of Biomedical Optics 14
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, 054007
September/October 2009
Journal of Biomedical Optics
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In the case of a
360-deg
scan, this focusing effect results in a
uniform central imaging region of approximate
16 mm
in di-
ameter. A 16-channel data-acquisition module and dedicated
channel detection electronics allow capture of a
90-deg
field-
of-view image in less than one second when a
10-Hz
pulse
repetition rate laser is employed, and a complete
360-deg
scan can be achieved through sample rotation within
15 s
.
The technical design and systematic evaluation of this sys-
tem has been reported in detail previously.
19
,
20
The main pur-
pose of current paper is to demonstrate that this curved array
is capable of
in vivo
small animal brain imaging, especially
for functional imaging. Since the curved array was designed
for small animal functional brain imaging, to test and demon-
strate its capability is the first step for more complex brain
functional detection in the future. We report the applications
of the system on small animal brain imaging, including 3-D
cross-sectional brain imaging,
in vivo
brain cortex imaging,
and near real-time hemodynamic detection on a rat brain cor-
tex. The results suggest that the current system can perform
PAT of small animal brains to provide both structural and
functional information
in vivo
.
2 Methods and Materials
The schematic for the noninvasive photoacoustic tomography
of rat brains is shown in Fig.
1
. A Q-switched Nd:YAG laser
LS-2137/2, LOTIS TII
–pumped tunable Ti:sapphire laser
LT-2211A, LOTIS TII
was employed to provide laser pulses
with a
FWHM
15 ns
, a pulse repetition rate of
10 Hz
, and
a wavelength range of
750 to 820 nm
. The incident energy
density of the laser beam was controlled to be less than
15 mJ
/
cm
2
on the surface of the animal head, which is well
below the ANSI limit.
21
The beam was diverged with a con-
cave lens and homogenized by a circular diffuser to produce a
uniform illumination of approximately
20 mm
in diameter at
the sample. The laser light was positioned at the center of
curvature of the transducer and illuminated the sample or-
thogonal to the imaging plane of the transducer for maximum
uniformity.
In the animal experiments, Sprague Dawley rats
60
100 g
body weight
or Swiss Webster mice
25 g
body weight;
from Harlan Sprague Dawley, Inc., Indianapolis
were used.
For
in vivo
tests, a small animal was initially anesthetized by
the intramuscular injection of a mixture of
87 mg
/
kg
ket-
amine plus
13 mg
/
kg
xylazine. Subsequent anesthesia was
achieved by the inhalation of a mixture of
O
2
and isoflurane.
Before experiments, the hair on the head of the small animal
was depilated using hair removal lotion. The mouth and nose
of the animal were covered with a breathing mask to deliver
oxygen and anesthesia gas. A custom-designed animal holder
was used to fix the head of the animal with ear-pins and a
tooth-pin. The animal was placed in sitting position, and the
body of the animal was secured with surgical tapes to provide
support to the animal. During experiments, the small animal
and the animal holder were mounted on a rotary stage posi-
tioned at the center of the curved array transducer. The rotary
stage could be turned in
90-deg
increments to simulate the
angular view of a full ring array. The head of the small animal
was adjusted so that the brain cortex surface was parallel with
the imaging plane. After the data acquisition for PAT, the ani-
mal was sacrificed by the intraperitoneal injection of highly
concentrated pentobarbital.
In the measurements of blood oxygenation, we assumed
that deoxyhemoglobin
Hb
and oxyhemoglobin
HbO
2
were
the dominant absorbing compounds in blood at two wave-
lengths
1
and
2
. Relative total hemoglobin concentration
rHbT
and blood oxygen saturation
SO
2
could then be cal-
culated using the detected optical absorptions at the two ap-
plied wavelengths:
22
–
24
rHbT =
HbO
2
+
Hb
=
a
1
Hb
2
−
a
2
Hb
1
Hb
1
Hb
O
2
2
−
Hb
2
Hb
O
2
1
,
1
SO
2
=
HbO
2
HbO
2
+
Hb
=
a
2
Hb
1
−
a
1
Hb
2
a
1
Hb
2
−
a
2
Hb
1
,
2
where
a
is the absorption coefficient;
Hb
and
Hb
O
2
are the
known molar extinction coefficients of Hb and
HbO
2
, respec-
tively;
Hb
=
Hb
O
2
−
Hb
; and
Hb
and
HbO
2
are the con-
centrations of the two forms of hemoglobin, respectively. By
irradiating an animal head with light at two different wave-
lengths,
1
and
2
, independently, we could get two photoa-
coustic images that represent the distributions of the optical
energy deposition in the cerebral cortex corresponding to the
two wavelengths. The optical energy deposition is dependent
on the optical absorption and the light fluence at specific lo-
cation. Considering that the skin and skull covering the brain
are relatively homogeneous, the light fluence in the brain ce-
rebral cortex is similarly homogeneously distributed in the
horizontal plane at the two wavelengths. We can then calcu-
late the images of an absolute estimation of
SO
2
based on
Eq.
2
.
3 Results and Discussions
Three-dimensional
3-D
PAT brain images of a mouse were
obtained
in situ
noninvasively as a series of 2-D cross sec-
tions. The animal was sacrificed before the experiment,
mounted to the rotary stage, and then immersed in the water
tank. The laser wavelength used was
797 nm
. Figure
2
shows
the PAT cross sections at different brain horizontal planes.
Figure
2
a
shows the cortex surface. Figures
2
b
–
2
e
show
the interior brain structures underneath the superficial cortex
with a
2-mm
increment along the depth. To illustrate the fea-
tures shown in these PAT images, we have labeled some char-
Fig. 1
Schematic of the curved array photoacoustic tomography
system.
Yang et al.: Photoacoustic tomography of small animal brain with a curved array transducer
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September/October 2009
Vol. 14
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acteristic tissue structures. An MRI image at a similar depth
as Fig.
2
d
is presented in Fig.
2
f
and shows good similari-
ties. In Fig.
2
d
, the ventricular system is clearly visible on
the image.
By rotating the sample, better quality images can be ob-
tained; however, the data acquisition speed is reduced. To get
near real-time imaging, we avoided rotation. With the current
quarter-ring array, we can have a
90-deg
view angle if no
rotation is employed. Although the image quality is degraded
and some information may be missing because of the incom-
plete data captured with no rotation, there are distinct advan-
tages. First, near real-time PAT images can be acquired, which
allow us to monitor the time-resolved change in a small ani-
mal. Second, instead of using water as the coupling material
between the transducer array and a sample, ultrasound gel can
be used as the coupling medium without worrying about cou-
pling problems caused by rotation. In PAT experiments re-
ported in the literature, water tanks have been used to hold
water for coupling while the detection transducer was
scanned. The use of ultrasound gel is much more convenient.
Furthermore, although with a
90-deg
view angle, the infor-
mation about the image is incomplete, we can focus on the
structures of interest one at a time without monitoring the
whole image.
Figure
3
shows an
in vivo
rat cortical cortex image ob-
tained with the curved array without rotating the transducer.
This image was obtained by using ultrasound gel as coupling
material; therefore, a water tank is not needed for this case. To
get complete structural information, a
360-deg
view angle is
required.
25
Because only
90-deg
view angle data was ac-
quired in the current situation, some structures are missing
from the image, including, notably, the sagittal sinus, which is
labeled in the open-skull photograph. However, Fig.
3
a
still
shows most of the blood vessels on the cortical surface, which
are oriented perpendicular or nearly perpendicular to the sag-
ittal sinus, and exhibits a good match with the open-skull
photograph shown in Fig.
3
b
. Most important, this PAT im-
age was acquired within
1s
, which is nearly real-time
monitoring. Therefore, with the current curved array, we can
provide fast-frame images at
1 frame
/
second
. The fast
frame rate allows us to monitor the changes in these blood
vessels in Fig.
3
a
as a function of time.
Figure
4
shows the
in vivo
measured photoacoustic signal
strength as a function of time as the blood oxygenation level
on the rat brain cortex changes. The signal strength was ob-
tained from the single blood vessel indicated as A in Fig.
3
a
.
The animal experienced two physiological statuses: normoxia
and hyperoxia. Figure
4
a
shows the hemodynamic changes
on the rat brain cortex when the physiological status changed
from normoxia to hyperoxia, and Figure
4
b
shows the he-
modynamic result when it changed from hyperoxia to nor-
moxia. The laser wavelength used was
771 nm
. At this wave-
length, deoxyhemoglobin has a greater extinction than
Fig. 2
In situ
3-D mouse brain images obtained by the curved array
photoacoustic tomography system. The images show horizontal cross
sections from the dorsal to the ventral part of the brain, where the
imaging depth is
a
0 mm,
b
2.0 mm,
c
4 mm,
d
6 mm, and
e
8.0 mm from the top surface of the mouse’s brain, with an interval of
2 mm. Major tissue structures are indicated on the images. An MRI
image at a similar depth as
d
is shown in
f
. The color bar shows the
relative magnitude of optical absorption. CB: cerebellum; RH: right
hemisphere; LH: left hemisphere; LV: lateral ventricle; TV: third ven-
tricle.
Color online only.
Fig. 3
PAT image from the curved array system without any rotation,
i.e., only a 90-deg view angle.
a
PAT image;
b
open-skull
photograph.
Fig. 4
Rat brain cortex hemodynamics with the curved array trans-
ducer.
a
The photoacoustic signal strength change on the rat brain
cortex when the physiological status changed from normoxia to hy-
peroxia;
b
the photoacoustic signal strength change when the physi-
ological status changed from hyperoxia to normoxia. The laser wave-
length was 771 nm. The error bars are the standard errors at each
measurement point.
Yang et al.: Photoacoustic tomography of small animal brain with a curved array transducer
Journal of Biomedical Optics
September/October 2009
Vol. 14
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