CpgCorrelationQualityMetric
CpG pairs
Number of CpG pairs
CpG pairs with atleast 10 reads each
CpG pairs with atleast 10 reads each
Pearson correlation
Pearson's correlation of CpG pairs with at least 10 reads each
GembsAlignmentQualityMetric
sequenced_reads
Number of sequenced reads
unmapped_reads
Number of unmapped reads
pct_unmapped_reads
Percentage of unmapped reads
correct_pairs
Number of correct pairs
general_reads
Number of general reads
average_coverage
Average coverage
pct_general_reads
Percentage of general reads
unique_fragments
Number of unique fragments
pct_unique_fragments
Percentage of unique fragments
conversion_rate
Bisulfite conversion rate
reads_under_conversion_control
Number of reads under conversion control
pct_reads_under_conversion_control
Percentage of reads under conversion control
reads_over_conversion_control
Number of reads over conversion control
pct_reads_over_conversion_control
Percentage of reads over conversion control
bisulfite_reads_c2t
Number of bisulfite reads C2T
pct_bisulfite_reads_c2t
Percentage of bisulfite reads C2T
bisulfite_reads_g2a
Number of bisulfite reads G2A
pct_bisulfite_reads_g2a
Percentage of bisulfite reads G2A