Published May 18, 2018 | Version Submitted + Supplemental Material
Journal Article Open

Single Day Construction of Multigene Circuits with 3G Assembly

Abstract

The ability to rapidly design, build, and test prototypes is of key importance to every engineering discipline. DNA assembly often serves as a rate limiting step of the prototyping cycle for synthetic biology. Recently developed DNA assembly methods such as isothermal assembly and type IIS restriction enzyme systems take different approaches to accelerate DNA construction. We introduce a hybrid method, Golden Gate-Gibson (3G), that takes advantage of modular part libraries introduced by type IIS restriction enzyme systems and isothermal assembly's ability to build large DNA constructs in single pot reactions. Our method is highly efficient and rapid, facilitating construction of entire multigene circuits in a single day. Additionally, 3G allows generation of variant libraries enabling efficient screening of different possible circuit constructions. We characterize the efficiency and accuracy of 3G assembly for various construct sizes, and demonstrate 3G by characterizing variants of an inducible cell-lysis circuit.

Additional Information

© 2018 American Chemical Society. Received: February 9, 2018; Published: May 1, 2018. pSal, pLas, NahR, and LasR plasmids were generously provided by Adam Meyer.(16) Plasmid vectors were provided by Douglas Densmore at the Cross-disciplinary Integration of Design Automation Research lab (Addgene Kit # 1000000059). The project depicted was sponsored by the Defense Advanced Research Projects Agency (Agreement HR0011-17-2-0008). The content of the information does not necessarily reflect the position or the policy of the Government, and no official endorsement should be inferred. The authors declare no competing financial interest.

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Submitted - 260851.full.pdf

Supplemental Material - sb8b00060_si_001.pdf

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Additional details

Additional titles

Alternative title
Single day construction of multi-gene circuits with 3G assembly

Identifiers

Eprint ID
85692
Resolver ID
CaltechAUTHORS:20180409-133942183

Related works

Describes
10.1101/260851 (DOI)

Funding

Defense Advanced Research Projects Agency (DARPA)
HR0011-17-2-0008

Dates

Created
2018-04-09
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Updated
2023-06-01
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