Number of items: 62.
2019
Ward, Lewis M.
and
Shih, Patrick M.
and
Hemp, James
et al.
(2019)
Phototrophic Methane Oxidation in a Member of the Chloroflexi Phylum.
.
(Unpublished)
http://resolver.caltech.edu/CaltechAUTHORS:20190130-121936798
Hanewich-Hollatz, Mikhail H.
and
Chen, Zhewei
and
Huang, Jining
et al.
(2019)
Conditional Guide RNAs: Programmable Conditional Regulation of CRISPR/Cas Function in Bacteria via Dynamic RNA Nanotechnology.
.
(Unpublished)
http://resolver.caltech.edu/CaltechAUTHORS:20190123-124341981
2018
Neubauer, Cajetan
and
Sessions, Alex L.
and
Booth, Ian R.
et al.
(2018)
Towards measuring growth rates of pathogens during infections by D_2O-labeling lipidomics.
Rapid Communications in Mass Spectrometry, 32
(24).
pp. 2129-2140.
ISSN 0951-4198.
http://resolver.caltech.edu/CaltechAUTHORS:20181003-105017642
Schretter, Catherine E.
and
Vielmetter, Jost
and
Bartos, Imre
et al.
(2018)
A gut microbial factor modulates locomotor behavior in Drosophila.
Nature, 563
(7731).
pp. 402-406.
ISSN 0028-0836.
http://resolver.caltech.edu/CaltechAUTHORS:20180905-135438422
Michel, Alice J.
and
Ward, Lewis M.
and
Goffredi, Shana K.
et al.
(2018)
The gut of the finch: uniqueness of the gut microbiome of the Galápagos vampire finch.
Microbiome, 6
.
Art. No. 167.
ISSN 2049-2618.
PMCID PMC6146768.
http://resolver.caltech.edu/CaltechAUTHORS:20180919-102939169
Lu, George J.
and
Farhadi, Arash
and
Mukherjee, Arnab
et al.
(2018)
Proteins, air and water: reporter genes for ultrasound and magnetic resonance imaging.
Current Opinion in Chemical Biology, 45
.
pp. 57-63.
ISSN 1367-5931.
http://resolver.caltech.edu/CaltechAUTHORS:20180322-135005180
Lewis, Russell D.
and
Garcia-Borràs, Marc
and
Chalkley, Matthew J.
et al.
(2018)
Catalytic iron-carbene intermediate revealed in a cytochrome c carbene transferase.
Proceedings of the National Academy of Sciences of the United States of America, 115
(28).
pp. 7308-7313.
ISSN 0027-8424.
PMCID PMC6048479.
http://resolver.caltech.edu/CaltechAUTHORS:20180626-131945645
Maresca, David
and
Lakshmanan, Anupama
and
Abedi, Mohamed
et al.
(2018)
Biomolecular Ultrasound and Sonogenetics.
Annual Review of Chemical and Biomolecular Engineering, 9
.
pp. 229-252.
ISSN 1947-5438.
http://resolver.caltech.edu/CaltechAUTHORS:20180330-152125173
Rosenthal, Adam Z.
and
Qi, Yutao
and
Hormoz, Sahand
et al.
(2018)
Metabolic interactions between dynamic bacterial subpopulations.
eLife, 7
.
Art. No. e33099.
ISSN 2050-084X.
PMCID PMC6025961.
http://resolver.caltech.edu/CaltechAUTHORS:20180604-074815229
Chalkley, Matthew J.
and
Del Castillo, Trevor J.
and
Matson, Benjamin D.
et al.
(2018)
Fe-Mediated Nitrogen Fixation with a Metallocene Mediator: Exploring pK_a Effects and Demonstrating Electrocatalysis.
Journal of the American Chemical Society, 140
(19).
pp. 6122-6129.
ISSN 0002-7863.
http://resolver.caltech.edu/CaltechAUTHORS:20180418-164723702
Arnett, Charles H. and Chalkley, Matthew J. and Agapie, Theodor
(2018)
A Thermodynamic Model for Redox-Dependent Binding of Carbon Monoxide at Site-Differentiated, High Spin Iron Clusters.
Journal of the American Chemical Society, 140
(16).
pp. 5569-5578.
ISSN 0002-7863.
http://resolver.caltech.edu/CaltechAUTHORS:20180329-110229274
Brandenberg, Oliver F.
and
Prier, Christopher K.
and
Chen, Kai
et al.
(2018)
Stereoselective Enzymatic Synthesis of Heteroatom-Substituted Cyclopropanes.
ACS Catalysis, 8
(4).
pp. 2629-2634.
ISSN 2155-5435.
http://resolver.caltech.edu/CaltechAUTHORS:20180312-085606768
Subramanian, Poorna
and
Pirbadian, Sahand
and
El-Naggar, Mohamed Y.
et al.
(2018)
Ultrastructure of Shewanella oneidensis MR-1 nanowires revealed by electron cryotomography.
Proceedings of the National Academy of Sciences of the United States of America, 115
(14).
E3246-E3255.
ISSN 0027-8424.
PMCID PMC5889646.
http://resolver.caltech.edu/CaltechAUTHORS:20170619-134442390
Knight, Anders M.
and
Kan, S. B. Jennifer
and
Lewis, Russell D.
et al.
(2018)
Diverse engineered heme proteins enable stereodivergent cyclopropanation of unactivated alkenes.
ACS Central Science, 4
(3).
pp. 372-377.
ISSN 2374-7943.
PMCID PMC5879470.
http://resolver.caltech.edu/CaltechAUTHORS:20171220-092532762
Ward, Lewis M.
and
Hemp, James
and
Shih, Patrick M.
et al.
(2018)
Evolution of Phototrophy in the Chloroflexi Phylum Driven by Horizontal Gene Transfer.
Frontiers in Microbiology, 9
.
Art. No. 260.
ISSN 1664-302X.
http://resolver.caltech.edu/CaltechAUTHORS:20180307-130527925
Davis, Hunter C.
and
Ramesh, Pradeep
and
Bhatnagar, Aadyot
et al.
(2018)
Mapping the microscale origins of magnetic resonance image contrast with subcellular diamond magnetometry.
Nature Communications, 9
.
Art. No. 131.
ISSN 2041-1723.
PMCID PMC5760582.
http://resolver.caltech.edu/CaltechAUTHORS:20161205-095517669
2017
Niesen, Michiel J. M.
and
Marshall, Stephen S.
and
Miller, Thomas F., III
et al.
(2017)
Improving membrane protein expression by optimizing integration efficiency.
Journal of Biological Chemistry, 292
(47).
pp. 19537-19545.
ISSN 0021-9258.
PMCID PMC5702688.
http://resolver.caltech.edu/CaltechAUTHORS:20170925-084831113
Piraner, Dan I.
and
Farhadi, Arash
and
Davis, Hunter C.
et al.
(2017)
Going Deeper: Biomolecular Tools for Acoustic and Magnetic Imaging and Control of Cellular Function.
Biochemistry, 56
(39).
pp. 5202-5209.
ISSN 0006-2960.
http://resolver.caltech.edu/CaltechAUTHORS:20170814-132937862
Oikonomou, Catherine M. and Jensen, Grant J.
(2017)
Cellular Electron Cryotomography: Toward Structural Biology In Situ.
Annual Review of Biochemistry, 86
.
pp. 873-896.
ISSN 0066-4154.
http://resolver.caltech.edu/CaltechAUTHORS:20170421-082204689
Bedbrook, Claire N.
and
Rice, Austin J.
and
Yang, Kevin K.
et al.
(2017)
Structure-guided SCHEMA recombination generates diverse chimeric channelrhodopsins.
Proceedings of the National Academy of Sciences of the United States of America, 114
(13).
E2624-E2633.
ISSN 0027-8424.
PMCID PMC5380088.
http://resolver.caltech.edu/CaltechAUTHORS:20170310-130542741
Herwig, Lukas
and
Rice, Austin J.
and
Bedbrook, Claire N.
et al.
(2017)
Directed Evolution of a Bright Near-Infrared Fluorescent Rhodopsin Using a Synthetic Chromophore.
Cell Chemical Biology, 24
(3).
pp. 415-425.
ISSN 2451-9456.
PMCID PMC5357175.
http://resolver.caltech.edu/CaltechAUTHORS:20170307-082231020
Rittle, Jonathan and Peters, Jonas C.
(2017)
N-H Bond Dissociation Enthalpies and Facile H-atom Transfers for Early Intermediates of Fe-N_2 and Fe-CN Reductions.
Journal of the American Chemical Society, 139
(8).
pp. 3161-3170.
ISSN 0002-7863.
http://resolver.caltech.edu/CaltechAUTHORS:20170201-092020177
Glenn, Weslee S.
and
Stone, Shannon E.
and
Ho, Samuel H.
et al.
(2017)
BONCAT enables time-resolved analysis of protein synthesis in native plant tissue.
Plant Physiology, 173
(3).
pp. 1543-1553.
ISSN 0032-0889.
http://resolver.caltech.edu/CaltechAUTHORS:20170123-111643957
Stone, Shannon E.
and
Glenn, Weslee S.
and
Hamblin, Graham D.
et al.
(2017)
Cell-selective proteomics for biological discovery.
Current Opinion in Chemical Biology, 36
.
pp. 50-57.
ISSN 1367-5931.
PMCID PMC5337159.
http://resolver.caltech.edu/CaltechAUTHORS:20170117-150138453
Maker, Allison
and
Hemp, James
and
Pace, Laura A.
et al.
(2017)
Draft Genome Sequence of Hydrogenibacillus schlegelii MA48, a Deep-Branching Member of the Bacilli Class of Firmicutes.
Genome Announcements, 5
(3).
Art. No. e00380-16.
ISSN 2169-8287.
PMCID PMC5255923.
http://resolver.caltech.edu/CaltechAUTHORS:20170130-083631885
Shih, P. M.
and
Hemp, J.
and
Ward, L. M.
et al.
(2017)
Crown group Oxyphotobacteria postdate the rise of oxygen.
Geobiology, 15
(1).
pp. 19-29.
ISSN 1472-4677.
http://resolver.caltech.edu/CaltechAUTHORS:20160718-081438054
2016
Ho, Samuel H. and Tirrell, David A.
(2016)
Chemoenzymatic Labeling of Proteins for Imaging in Bacterial Cells.
Journal of the American Chemical Society, 138
(46).
pp. 15098-15101.
ISSN 0002-7863.
http://resolver.caltech.edu/CaltechAUTHORS:20161116-100355067
Hemp, James
and
Lücker, Sebastian
and
Schott, Joachim
et al.
(2016)
Genomics of a phototrophic nitrite oxidizer: insights into the evolution of photosynthesis and nitrification.
ISME Journal, 10
(11).
pp. 2669-2678.
ISSN 1751-7362.
http://resolver.caltech.edu/CaltechAUTHORS:20160425-075949394
Skennerton, Connor T.
and
Haroon, Mohamed F.
and
Briegel, Ariane
et al.
(2016)
Phylogenomic analysis of Candidatus ‘Izimaplasma’ species: free-living representatives from a Tenericutes clade found in methane seeps.
ISME Journal, 10
(11).
pp. 2679-2692.
ISSN 1751-7362.
PMCID PMC5113845.
http://resolver.caltech.edu/CaltechAUTHORS:20160418-080655842
DePas, William H.
and
Starwalt-Lee, Ruth
and
Van Sambeek, Lindsey
et al.
(2016)
Exposing the Three-Dimensional Biogeography and Metabolic States of Pathogens in Cystic Fibrosis Sputum via Hydrogel Embedding, Clearing, and rRNA Labeling.
mBio, 7
(5).
e00796-16.
ISSN 2150-7511.
PMCID PMC5040109.
http://resolver.caltech.edu/CaltechAUTHORS:20160927-144217261
Marshall, Stephen S.
and
Niesen, Michiel J. M.
and
Müller, Axel
et al.
(2016)
A Link between Integral Membrane Protein Expression and Simulated Integration Efficiency.
Cell Reports, 16
(8).
pp. 2169-2177.
ISSN 2211-1247.
PMCID PMC5001948.
http://resolver.caltech.edu/CaltechAUTHORS:20160816-075308782
Fischer, Woodward W. and Hemp, James and Johnson, Jena E.
(2016)
Evolution of Oxygenic Photosynthesis.
Annual Review of Earth and Planetary Sciences, 44
.
pp. 647-683.
ISSN 0084-6597.
http://resolver.caltech.edu/CaltechAUTHORS:20160531-083106180
Xiao, Cheng
and
Cho, Jounhong Ryan
and
Zhou, Chunyi
et al.
(2016)
Cholinergic Mesopontine Signals Govern Locomotion and Reward through Dissociable Midbrain Pathways.
Neuron, 90
(2).
pp. 333-347.
ISSN 0896-6273.
PMCID PMC4840478.
http://resolver.caltech.edu/CaltechAUTHORS:20160420-090626768
Oikonomou, Catherine M. and Jensen, Grant J.
(2016)
A new view into prokaryotic cell biology from electron cryotomography.
Nature Reviews Microbiology, 14
(4).
pp. 205-220.
ISSN 1740-1526.
PMCID PMC5551487.
http://resolver.caltech.edu/CaltechAUTHORS:20160307-090319472
Rittle, Jonathan and Peters, Jonas C.
(2016)
An Fe-N_2 Complex That Generates Hydrazine and Ammonia via Fe═NNH_2: Demonstrating a Hybrid Distal-to-Alternating Pathway for N_2 Reduction.
Journal of the American Chemical Society, 138
(12).
pp. 4243-4248.
ISSN 0002-7863.
PMCID PMC5065353.
http://resolver.caltech.edu/CaltechAUTHORS:20160328-143527690
Ward, Lewis M. and Kirschvink, Joseph L. and Fischer, Woodward W.
(2016)
Timescales of Oxygenation Following the Evolution of Oxygenic Photosynthesis.
Origins of life and evolution of the biosphere, 46
(1).
pp. 51-65.
ISSN 0169-6149.
http://resolver.caltech.edu/CaltechAUTHORS:20150825-080916332
2015
Spatzal, Thomas
and
Perez, Kathryn A.
and
Howard, James B.
et al.
(2015)
Catalysis-dependent selenium incorporation and migration in the nitrogenase active site iron-molybdenum cofactor.
eLife, 4
.
Art. No. e11620.
ISSN 2050-084X.
PMCID PMC4755756.
http://resolver.caltech.edu/CaltechAUTHORS:20151221-153134644
Hemp, James
and
Ward, Lewis M.
and
Pace, Laura A.
et al.
(2015)
Draft Genome Sequence of Ardenticatena maritime 110S, a Thermophilic Nitrate- and Iron-Reducing Member of the Chloroflexi Class Ardenticatenia.
Genome Announcements, 3
(6).
Art. No. e01347-15.
ISSN 2169-8287.
PMCID PMC4653789.
http://resolver.caltech.edu/CaltechAUTHORS:20151221-091145750
Ward, Lewis M.
and
Hemp, James
and
Pace, Laura A.
et al.
(2015)
Draft Genome Sequence of Herpetosiphon geysericola GC-42, a Nonphototrophic Member of the Chloroflexi Class Chloroflexia.
Genome Announcements, 3
(6).
Art. No. e01352-15.
ISSN 2169-8287.
PMCID PMC4653791.
http://resolver.caltech.edu/CaltechAUTHORS:20151221-090706555
Ward, Lewis M.
and
Hemp, James
and
Pace, Laura A.
et al.
(2015)
Draft Genome Sequence of Leptolinea tardivitalis YMTK-2, a Mesophilic Anaerobe from the Chloroflexi Class Anaerolineae.
Genome Announcements, 3
(6).
Art. No. e01356-15.
ISSN 2169-8287.
PMCID PMC4653795.
http://resolver.caltech.edu/CaltechAUTHORS:20151221-084953964
Hemp, James
and
Ward, Lewis M.
and
Pace, Laura A.
et al.
(2015)
Draft Genome Sequence of Levilinea saccharolytica KIBI-1, a Member of the Chloroflexi Class Anaerolineae.
Genome Announcements, 3
(6).
Art. No. e01357-15.
ISSN 2169-8287.
PMCID PMC4653796.
http://resolver.caltech.edu/CaltechAUTHORS:20151221-084436954
Hemp, James
and
Ward, Lewis M.
and
Pace, Laura A.
et al.
(2015)
Draft Genome Sequence of Ornatilinea apprima P3M-1, an Anaerobic Member of the Chloroflexi Class Anaerolineae.
Genome Announcements, 3
(6).
Art. No. e01353-15.
ISSN 2169-8287.
PMCID PMC4653791.
http://resolver.caltech.edu/CaltechAUTHORS:20151221-090203951
Pace, Laura A.
and
Hemp, James
and
Ward, Lewis M.
et al.
(2015)
Draft Genome of Thermanaerothrix daxensis GNS-1, a Thermophilic Facultative Anaerobe from the Chloroflexi Class Anaerolineae.
Genome Announcements, 3
(6).
Art. No. e01354-15.
ISSN 2169-8287.
PMCID PMC4653792.
http://resolver.caltech.edu/CaltechAUTHORS:20151221-085728522
Fischer, Woodward W. and Hemp, James and Johnson, Jena E.
(2015)
Manganese and the Evolution of Photosynthesis.
Origins of Life and Evolution of Biospheres, 45
(3).
pp. 351-357.
ISSN 0169-6149.
http://resolver.caltech.edu/CaltechAUTHORS:20150602-140446953
Rasmussen, Tim
and
Rasmussen, Akiko
and
Singh, Shivani
et al.
(2015)
Properties of the Mechanosensitive Channel MscS Pore Revealed by Tryptophan Scanning Mutagenesis.
Biochemistry, 54
(29).
pp. 4519-4530.
ISSN 0006-2960.
PMCID PMC4519979.
http://resolver.caltech.edu/CaltechAUTHORS:20150827-104629563
Anderson, John S.
and
Cutsail, George E., III
and
Rittle, Jonathan
et al.
(2015)
Characterization of an Fe≡N−NH_2 Intermediate Relevant to Catalytic N_2 Reduction to NH_3.
Journal of the American Chemical Society, 137
(24).
pp. 7803-7809.
ISSN 0002-7863.
PMCID PMC4603982.
http://resolver.caltech.edu/CaltechAUTHORS:20150708-084228936
Yano, Jessica M.
and
Yu, Kristie
and
Donaldson, Gregory P.
et al.
(2015)
Indigenous Bacteria from the Gut Microbiota Regulate Host Serotonin Biosynthesis.
Cell, 161
(2).
pp. 264-276.
ISSN 0092-8674.
PMCID PMC4393509.
http://resolver.caltech.edu/CaltechAUTHORS:20150409-093248232
Booth, Ian R.
and
Miller, Samantha
and
Müller, Axel
et al.
(2015)
The evolution of bacterial mechanosensitive channels.
Cell Calcium, 57
(3).
pp. 140-150.
ISSN 0143-4160.
http://resolver.caltech.edu/CaltechAUTHORS:20150121-095159810
Grodick, Michael A. and Muren, Natalie B. and Barton, Jacqueline K.
(2015)
DNA Charge Transport within the Cell.
Biochemistry, 54
(4).
pp. 962-973.
ISSN 0006-2960.
PMCID PMC4587570.
http://resolver.caltech.edu/CaltechAUTHORS:20150202-150621170
Zhang, Li-Mei
and
Morrison, Christine N.
and
Kaiser, Jens T.
et al.
(2015)
Nitrogenase MoFe protein from Clostridium pasteurianum at 1.08 Å resolution: comparison with the Azotobacter vinelandii MoFe protein.
Acta Crystallographica Section D: Biological Crystallography, 71
(2).
pp. 274-282.
ISSN 0907-4449.
PMCID PMC4321486.
http://resolver.caltech.edu/CaltechAUTHORS:20150310-101137660
2014
Spatzal, Thomas
and
Perez, Kathryn A.
and
Einsle, Oliver
et al.
(2014)
Ligand binding to the FeMo-cofactor: Structures of CO-bound and reactivated nitrogenase.
Science, 345
(6204).
pp. 1620-1623.
ISSN 0036-8075.
PMCID PMC4205161.
http://resolver.caltech.edu/CaltechAUTHORS:20140721-203544454
Grodick, Michael A.
and
Segal, Helen M.
and
Zwang, Theodore J.
et al.
(2014)
DNA-Mediated Signaling by Proteins with 4Fe−4S Clusters Is
Necessary for Genomic Integrity.
Journal of the American Chemical Society, 136
(17).
pp. 6470-6478.
ISSN 0002-7863.
PMCID PMC4017601.
http://resolver.caltech.edu/CaltechAUTHORS:20140422-093606577
Booth, Ian R.
(2014)
Bacterial mechanosensitive channels: progress towards an understanding of their roles in cell physiology.
Current Opinion in Microbiology, 18
.
pp. 16-22.
ISSN 1369-5274.
PMCID PMC4005912.
http://resolver.caltech.edu/CaltechAUTHORS:20140403-100546813
Lucey, Kaitlyn S. and Leadbetter, Jared R.
(2014)
Catechol 2,3-dioxygenase and other meta-cleavage catabolic pathway genes in the “anaerobic” termite gut spirochete Treponema primitia.
Molecular Ecology, 23
(6).
pp. 1531-1543.
ISSN 0962-1083.
http://resolver.caltech.edu/CaltechAUTHORS:20131204-090224188
Pilhofer, Martin
and
Aistleitner, Karin
and
Ladinsky, Mark S.
et al.
(2014)
Architecture and host interface of environmental chlamydiae revealed by electron cryotomography.
Environmental Microbiology, 16
(2).
pp. 417-429.
ISSN 1462-2912.
PMCID PMC4949044.
http://resolver.caltech.edu/CaltechAUTHORS:20140318-101020463
Shikuma, Nicholas J.
and
Pilhofer, Martin
and
Weiss, Gregor L.
et al.
(2014)
Marine Tubeworm Metamorphosis Induced by Arrays of Bacterial Phage Tail–Like Structures.
Science, 343
(6170).
pp. 529-533.
ISSN 0036-8075.
PMCID PMC4949041.
http://resolver.caltech.edu/CaltechAUTHORS:20140113-134430398
Olovnikov, Ivan and Le Thomas, Adrien and Aravin, Alexei A.
(2014)
A Framework for piRNA Cluster Manipulation.
In:
PIWI-Interacting RNAs: Methods and Protocols.
Methods in Molecular Biology.
No.1093.
Humana Press
, New York, NY, pp. 47-58.
ISBN 978-1-62703-693-1.
http://resolver.caltech.edu/CaltechAUTHORS:20131112-093205322
2013
Pilhofer, Martin
and
Aistleitner, Karin
and
Biboy, Jacob
et al.
(2013)
Discovery of chlamydial peptidoglycan reveals bacteria with murein sacculi but without FtsZ.
Nature Communications, 4
(12).
Art. No. 2856.
ISSN 2041-1723.
http://resolver.caltech.edu/CaltechAUTHORS:20140204-110344222
Matson, Eric G.
and
Rosenthal, Adam Z.
and
Zhang , Xinning
et al.
(2013)
Genome-Wide Effects of Selenium and Translational Uncoupling on Transcription in the Termite Gut Symbiont Treponema primitia.
mBio, 4
(6).
Art. No. e00869-13.
ISSN 2150-7511.
PMCID PMC3892789.
http://resolver.caltech.edu/CaltechAUTHORS:20140123-094750237
Rosenthal, Adam Z.
and
Zhang, Xinning
and
Lucey, Kaitlyn S.
et al.
(2013)
Localizing transcripts to single cells suggests an important role of uncultured deltaproteobacteria in the termite gut hydrogen economy.
Proceedings of the National Academy of Sciences of the United States of America, 110
(40).
pp. 16163-16168.
ISSN 0027-8424.
PMCID PMC3791709.
http://resolver.caltech.edu/CaltechAUTHORS:20130930-102728287
Olovnikov, Ivan
and
Chan, Ken
and
Sachidanandam, Ravi
et al.
(2013)
Bacterial Argonaute Samples the Transcriptome to Identify Foreign DNA.
Molecular Cell, 51
(5).
pp. 594-605.
ISSN 1097-2765.
PMCID PMC3809076.
http://resolver.caltech.edu/CaltechAUTHORS:20140220-100231898
Tocheva, Elitza I.
and
Dekas, Anne E.
and
McGlynn, Shawn E.
et al.
(2013)
Polyphosphate Storage during Sporulation in the Gram-Negative Bacterium Acetonema longum.
Journal of Bacteriology, 195
(17).
pp. 3940-3946.
ISSN 0021-9193.
PMCID PMC3754598.
http://resolver.caltech.edu/CaltechAUTHORS:20130909-141442695
This list was generated on Sat Feb 16 05:03:11 2019 PST.
