Items where Research Group Name is "Heritage Medical Research Institute"

2021

Qu, Zijie and Schildknecht, Dominik and Shadkhoo, Shahriar et al. (2021) Persistent fluid flows defined by active matter boundaries. Communications Physics, 4 . Art. No. 198. ISSN 2399-3650. doi:10.1038/s42005-021-00703-3. https://resolver.caltech.edu/CaltechAUTHORS:20201110-143708446

Wong, Alice R. and Fastuca, Nicholas J. and Mak, Victor W. et al. (2021) Total Syntheses of the C₁₉ Diterpenoid Alkaloids (–)-Talatisamine, (–)-Liljestrandisine, and (–)-Liljestrandinine by a Fragment Coupling Approach. ACS Central Science, 7 (8). pp. 1311-1316. ISSN 2374-7951. PMCID PMC8393236. doi:10.1021/acscentsci.1c00540. https://resolver.caltech.edu/CaltechAUTHORS:20210513-103036703

Bhat, Prashant and Honson, Drew and Guttman, Mitchell (2021) Nuclear compartmentalization as a mechanism of quantitative control of gene expression. Nature Reviews. Molecular Cell Biology . ISSN 1471-0072. doi:10.1038/s41580-021-00387-1. (In Press) https://resolver.caltech.edu/CaltechAUTHORS:20210803-140228133

Schildknecht, Dominik and Thomson, Matt (2021) Phenomenological model of motility by spatiotemporal modulation of active interactions. New Journal of Physics, 23 (8). Art. No. 083001. ISSN 1367-2630. doi:10.1088/1367-2630/ac1144. https://resolver.caltech.edu/CaltechAUTHORS:20200811-074939566

Sawyer, Daniel P. and Bar-Zion, Avinoam and Farhadi, Arash et al. (2021) Ultrasensitive ultrasound imaging of gene expression with signal unmixing. Nature Methods, 18 (8). pp. 945-952. ISSN 1548-7091. doi:10.1038/s41592-021-01229-w. https://resolver.caltech.edu/CaltechAUTHORS:20210601-112517625

Sharma, Saransh and Telikicherla, Aditya and Ding, Grace et al. (2021) Wireless 3D Surgical Navigation and Tracking System With 100μm Accuracy Using Magnetic-Field Gradient-Based Localization. IEEE Transactions on Medical Imaging, 40 (8). pp. 2066-2079. ISSN 0278-0062. doi:10.1109/tmi.2021.3071120. https://resolver.caltech.edu/CaltechAUTHORS:20210409-105849791

Li, Hongyi and Heath, John E and Trippett, James S. et al. (2021) Engineering Viral Vectors for Acoustically Targeted Gene Delivery. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20210729-152223015

Holman, K. R. and Stanko, A. M. and Reisman, S. E. (2021) Palladium-catalyzed cascade cyclizations involving C–C and C–X bond formation: strategic applications in natural product synthesis. Chemical Society Reviews, 50 (14). pp. 7891-7908. ISSN 0306-0012. https://resolver.caltech.edu/CaltechAUTHORS:20210527-093457647

Wu, Wei-Li and Adame, Mark D. and Liou, Chia-Wei et al. (2021) Microbiota regulate social behaviour via stress response neurons in the brain. Nature, 595 (7867). pp. 409-414. ISSN 0028-0836. PMCID PMC8346519. doi:10.1038/s41586-021-03669-y. https://resolver.caltech.edu/CaltechAUTHORS:20210706-202344110

Maser, Michael R. and Reisman, Sarah E. (2021) 3D Computer Vision Models Predict DFT-Level HOMO-LUMO Gap Energies from Force-Field-Optimized Geometries. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20210721-215809226

Fan, Jiang-peng and Geng, Hui-zhen and Ji, Ya-wei et al. (2021) Age-dependent alterations in key components of the nigrostriatal dopaminergic system and distinct motor phenotypes. Acta Pharmacologica Sinica . ISSN 1671-4083. doi:10.1038/s41401-021-00713-5. (In Press) https://resolver.caltech.edu/CaltechAUTHORS:20210709-224144084

Yao, Yuxing and Jin, Zhiyang and Ling, Bill et al. (2021) Self-assembly of protein superstructures by physical interactions under cytoplasm-like conditions. Biophysical Journal, 120 (13). pp. 2701-2709. ISSN 0006-3495. doi:10.1016/j.bpj.2021.05.007. https://resolver.caltech.edu/CaltechAUTHORS:20210713-205818850

Wang, Zitong Jerry and Thomson, Matt (2021) Signaling receptor localization maximizes cellular information acquisition in spatially-structured, natural environments. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20210707-155629727

Pleiner, Tino and Hazu, Masami and Pinton Tomaleri, Giovani et al. (2021) WNK1 is an assembly factor for the human ER membrane protein complex. Molecular Cell, 81 (13). pp. 2693-2704. ISSN 1097-2765. PMCID PMC8254792. doi:10.1016/j.molcel.2021.04.013. https://resolver.caltech.edu/CaltechAUTHORS:20200722-105320999

Brown, David and Altermatt, Michael and Dobreva, Tatyana et al. (2021) Deep parallel characterization of AAV tropism and AAV-mediated transcriptional changes via single-cell RNA sequencing. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20210629-153450418

Brandstätter, Marco and Turro, Raymond F. and Reisman, Sarah E. (2021) Nickel-Catalyzed Reductive Alkylation of Heteroaryl Imines. Cambridge University Press . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20210629-203340595

DeLano, Travis J. and Dibrell, Sara E. and Lacker, Caitlin R. et al. (2021) Nickel-catalyzed asymmetric reductive cross-coupling of α-chloroesters with (hetero)aryl iodides. Chemical Science, 12 (22). pp. 7758-7762. ISSN 2041-6520. PMCID PMC8188512. doi:10.1039/d1sc00822f. https://resolver.caltech.edu/CaltechAUTHORS:20210113-152642442

Rabut, Claire and Wu, Di and Ling, Bill et al. (2021) Ultrafast amplitude modulation for molecular and hemodynamic ultrasound imaging. Applied Physics Letters, 118 (24). Art. No. 244102. ISSN 0003-6951. PMCID PMC8205510. doi:10.1063/5.0050807. https://resolver.caltech.edu/CaltechAUTHORS:20210524-105548475

Norman, Sumner L. and Maresca, David and Christopoulos, Vasileios N. et al. (2021) Single-trial decoding of movement intentions using functional ultrasound neuroimaging. Neuron, 109 (9). pp. 1554-1566. ISSN 0896-6273. PMCID PMC8105283. doi:10.1016/j.neuron.2021.03.003. https://resolver.caltech.edu/CaltechAUTHORS:20200515-085712838

Farhadi, Arash and Sigmund, Felix and Westmeyer, Gil Gregor et al. (2021) Genetically encodable materials for non-invasive biological imaging. Nature Materials, 20 (5). pp. 585-592. ISSN 1476-1122. doi:10.1038/s41563-020-00883-3. https://resolver.caltech.edu/CaltechAUTHORS:20210201-105011829

Dutka, Przemysław and Malounda, Dina and Metskas, Lauren Ann et al. (2021) Measuring gas vesicle dimensions by electron microscopy. Protein Science, 30 (5). pp. 1081-1086. ISSN 0961-8368. doi:10.1002/pro.4056. https://resolver.caltech.edu/CaltechAUTHORS:20210125-082358436

Hurt, Robert C. and Buss, Marjorie T. and Wong, Katie et al. (2021) Genomically Mined Acoustic Reporter Genes Enable On-Demand In Vivo Monitoring of Tumor-Homing Bacteria. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20210429-092722876

Buss, Marjorie T. and Ramesh, Pradeep and English, Max Atticus et al. (2021) Spatial Control of Probiotic Bacteria in the Gastrointestinal Tract Assisted by Magnetic Particles. Advanced Materials, 33 (17). Art. No. 2007473. ISSN 0935-9648. doi:10.1002/adma.202007473. https://resolver.caltech.edu/CaltechAUTHORS:20210315-102208370

Yoo, Bryan B. and Griffiths, Jessica A and Thuy-Boun, Peter et al. (2021) Targeted Neuronal Activation of the Gastrointestinal Tract Shapes the Environment of the Gut in Mice. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20210414-072514678

Morais, Livia H. and Schreiber, Henry L., IV and Mazmanian, Sarkis K. (2021) The gut microbiota–brain axis in behaviour and brain disorders. Nature Reviews Microbiology, 19 (4). pp. 241-255. ISSN 1740-1526. https://resolver.caltech.edu/CaltechAUTHORS:20201022-112711587

Abedi, Mohamad H. and Yao, Michael S. and Mittelstein, David R. et al. (2021) Acoustic Remote Control of Bacterial Immunotherapy. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20210419-174632997

Cho, Jounhong Ryan and Chen, Xinhong and Kahan, Anat et al. (2021) Dorsal Raphe Dopamine Neurons Signal Motivational Salience Dependent on Internal State, Expectation, and Behavioral Context. Journal of Neuroscience, 41 (12). pp. 2645-2655. ISSN 0270-6474. PMCID PMC8018733. doi:10.1523/JNEUROSCI.2690-20.2021. https://resolver.caltech.edu/CaltechAUTHORS:20200728-094010838

Nakayama, Yasuaki and Maser, Michael R. and Okita, Tatsuya et al. (2021) Total Synthesis of Ritterazine B. Journal of the American Chemical Society, 143 (11). pp. 4187-4192. ISSN 0002-7863. https://resolver.caltech.edu/CaltechAUTHORS:20210202-123615131

Dibrell, Sara E. and Tao, Yujia and Reisman, Sarah E. (2021) Synthesis of Complex Diterpenes: Strategies Guided by Oxidation Pattern Analysis. Accounts of Chemical Research, 54 (6). pp. 1360-1373. ISSN 0001-4842. https://resolver.caltech.edu/CaltechAUTHORS:20210224-121416493

Chen, Kuan-Chang and Kuo, William Wei-Ting and Emami, Azita (2021) A 60-Gb/s PAM4 Wireline Receiver With 2-Tap Direct Decision Feedback Equalization Employing Track-and-Regenerate Slicers in 28-nm CMOS. IEEE Journal of Solid-State Circuits, 56 (3). pp. 750-762. ISSN 0018-9200. https://resolver.caltech.edu/CaltechAUTHORS:20201008-083808739

Talkhooncheh, Arian Hashemi and Yu, You and Agarwal, Abhinav et al. (2021) A Biofuel-Cell-Based Energy Harvester With 86% Peak Efficiency and 0.25-V Minimum Input Voltage Using Source-Adaptive MPPT. IEEE Journal of Solid-State Circuits, 56 (3). pp. 715-728. ISSN 0018-9200. https://resolver.caltech.edu/CaltechAUTHORS:20201120-095702860

Maser, Michael R. and Cui, Alexander Y. and Ryou, Serim et al. (2021) Multilabel Classification Models for the Prediction of Cross-Coupling Reaction Conditions. Journal of Chemical Information and Modeling, 61 (1). pp. 156-166. ISSN 1549-9596. https://resolver.caltech.edu/CaltechAUTHORS:20201015-152733539

Qu, Zijie and Jiang, Jialong and Lee, Heun Jin et al. (2021) Programming Boundary Deformation Patterns in Active Networks. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20210217-132137942

2020

Unger, Elizabeth K. and Keller, Jacob P. and Altermatt, Michael et al. (2020) Directed Evolution of a Selective and Sensitive Serotonin Sensor via Machine Learning. Cell, 183 (7). pp. 1986-2002. ISSN 0092-8674. PMCID PMC8025677. https://resolver.caltech.edu/CaltechAUTHORS:20201217-143607354

Zhu, Meng and Cornwall-Scoones, Jake and Wang, Peizhe et al. (2020) Developmental clock and mechanism of de novo polarization of the mouse embryo. Science, 370 (6522). Art. No. eabd2703. ISSN 0036-8075. PMCID PMC8210885. https://resolver.caltech.edu/CaltechAUTHORS:20201210-161600958

Banerjee, Abhik K. and Blanco, Mario R. and Bruce, Emily A. et al. (2020) SARS-CoV-2 disrupts splicing, translation, and protein trafficking to suppress host defenses. Cell, 183 (5). pp. 1325-1339. ISSN 0092-8674. PMCID PMC7543886. https://resolver.caltech.edu/CaltechAUTHORS:20201008-083809040

Dobreva, Tatyana and Brown, David and Park, Jong Hwee et al. (2020) Single cell profiling of capillary blood enables out of clinic human immunity studies. Scientific Reports, 10 . Art. No. 20540. ISSN 2045-2322. PMCID PMC7688970. https://resolver.caltech.edu/CaltechAUTHORS:20201130-100709314

Cowper, Nicholas G. W. and Hesse, Matthew J. and Chan, Katie M. et al. (2020) A copper-catalyzed asymmetric oxime propargylation enables the synthesis of the gliovirin tetrahydro-1,2-oxazine core. Chemical Science, 11 (43). pp. 11897-11901. ISSN 2041-6520. PMCID PMC8162951. doi:10.1039/d0sc04802j. https://resolver.caltech.edu/CaltechAUTHORS:20201015-152733817

Chen, Sisi and Rivaud, Paul and Park, Jong H. et al. (2020) Dissecting heterogeneous cell populations across drug and disease conditions with PopAlign. Proceedings of the National Academy of Sciences of the United States of America, 117 (46). pp. 28784-28794. ISSN 0027-8424. PMCID PMC7682438. https://resolver.caltech.edu/CaltechAUTHORS:20180927-114224716

Blom, Annet E. M. and Su, Justin Y. and Repka, Lindsay M. et al. (2020) Synthesis and Biological Evaluation of Pyrroloindolines as Positive Allosteric Modulators of the α1β2γ2 GABA_A Receptor. ACS Medicinal Chemistry Letters, 11 (11). pp. 2204-2211. ISSN 1948-5875. PMCID PMC7667864. https://resolver.caltech.edu/CaltechAUTHORS:20200924-152452617

Farhadi, Arash and Bedrossian, Manuel and Lee, Justin et al. (2020) Genetically Encoded Phase Contrast Agents for Digital Holographic Microscopy. Nano Letters, 20 (11). pp. 8127-8134. ISSN 1530-6984. https://resolver.caltech.edu/CaltechAUTHORS:20191113-111723156

Rabut, Claire and Yoo, Sangjin and Hurt, Robert C. et al. (2020) Ultrasound Technologies for Imaging and Modulating Neural Activity. Neuron, 108 (1). pp. 93-110. ISSN 0896-6273. https://resolver.caltech.edu/CaltechAUTHORS:20201019-101559925

Ling, Bill and Lee, Justin and Maresca, David et al. (2020) Biomolecular Ultrasound Imaging of Phagolysosomal Function. ACS Nano, 14 (9). pp. 12210-12221. ISSN 1936-0851. https://resolver.caltech.edu/CaltechAUTHORS:20200911-133137357

Lakshmanan, Anupama and Jin, Zhiyang and Nety, Suchita P. et al. (2020) Acoustic biosensors for ultrasound imaging of enzyme activity. Nature Chemical Biology, 16 (9). pp. 988-996. ISSN 1552-4450. https://resolver.caltech.edu/CaltechAUTHORS:20200713-133644814

Abedi, Mohamad H. and Lee, Justin and Piraner, Dan I. et al. (2020) Thermal Control of Engineered T-cells. ACS Synthetic Biology, 9 (8). pp. 1941-1950. ISSN 2161-5063. https://resolver.caltech.edu/CaltechAUTHORS:20200420-130655482

Poremba, Kelsey E. and Dibrell, Sara E. and Reisman, Sarah E. (2020) Nickel-Catalyzed Enantioselective Reductive Cross-Coupling Reactions. ACS Catalysis, 10 (15). pp. 8237-8246. ISSN 2155-5435. PMCID PMC7470226. https://resolver.caltech.edu/CaltechAUTHORS:20200624-154304037

Uran, Arda and Leblebici, Yusuf and Emami, Azita et al. (2020) An AC-Coupled Wideband Neural Recording Front-End With Sub-1 mm² × fJ/conv-step Efficiency and 0.97 NEF. IEEE Solid-State Circuits Letters, 3 . pp. 258-261. ISSN 2573-9603. https://resolver.caltech.edu/CaltechAUTHORS:20200806-153947821

Lu, George J. and Chou, Li-dek and Malounda, Dina et al. (2020) Genetically Encodable Contrast Agents for Optical Coherence Tomography. ACS Nano, 14 (7). pp. 7823-7831. ISSN 1936-0851. https://resolver.caltech.edu/CaltechAUTHORS:20190401-103122114

Pleiner, Tino and Pinton Tomaleri, Giovani and Januszyk, Kurt et al. (2020) Structural basis for membrane insertion by the human ER membrane protein complex. Science, 369 (6502). pp. 433-436. ISSN 0036-8075. https://resolver.caltech.edu/CaltechAUTHORS:20200521-122757560

Ryou, Serim and Maser, Michael R. and Cui, Alexander Y. et al. (2020) Graph Neural Networks for the Prediction of Substrate-Specific Organic Reaction Conditions. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20201110-154207213

Flytzanis, Nicholas C. and Goeden, Nick and Goertsen, David et al. (2020) Broad gene expression throughout the mouse and marmoset brain after intravenous delivery of engineered AAV capsids. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20200626-103613335

Kumar, Shailabh and Park, Haeri and Cho, Hyunjun et al. (2020) Overcoming evanescent field decay using 3D-tapered nanocavities for on-chip targeted molecular analysis. Nature Communications, 11 . Art. No. 2930. ISSN 2041-1723. PMCID PMC7287113. https://resolver.caltech.edu/CaltechAUTHORS:20200611-124557130

Ravindra Kumar, Sripriya and Miles, Timothy F. and Chen, Xinhong et al. (2020) Multiplexed Cre-dependent selection yields systemic AAVs for targeting distinct brain cell types. Nature Methods, 17 (5). pp. 541-550. ISSN 1548-7091. PMCID PMC7219404. https://resolver.caltech.edu/CaltechAUTHORS:20200121-141523675

Donaldson, Gregory P. and Chou, Wen-Chi and Manson, Abigail L. et al. (2020) Spatially distinct physiology of Bacteroides fragilis within the proximal colon of gnotobiotic mice. Nature Microbiology, 5 (5). pp. 746-756. ISSN 2058-5276. https://resolver.caltech.edu/CaltechAUTHORS:20200115-104219274

Dibrell, Sara E. and Maser, Michael R. and Reisman, Sarah E. (2020) SeO₂-Mediated Oxidative Transposition of Pauson–Khand Products. Journal of the American Chemical Society, 142 (14). pp. 6483-6487. ISSN 0002-7863. https://resolver.caltech.edu/CaltechAUTHORS:20200319-125552181

Maresca, David and Payen, Thomas and Lee-Gosselin, Audrey et al. (2020) Acoustic biomolecules enhance hemodynamic functional ultrasound imaging of neural activity. NeuroImage, 209 . Art. No. 116467. ISSN 1053-8119. PMCID PMC6955150. https://resolver.caltech.edu/CaltechAUTHORS:20190815-094537072

Mobbs, George W. and Hoelz, André (2020) Nucleoporin Condensates Drive Nuclear Pore Complex Assembly in Oocytes. Trends in Biochemical Sciences, 45 (4). pp. 278-280. ISSN 0968-0004. PMCID PMC7505689. https://resolver.caltech.edu/CaltechAUTHORS:20200213-082709014

Inglis, Alison J. and Page, Katharine R. and Guna, Alina et al. (2020) Differential modes of orphan subunit recognition for the WRB/CAML complex. Cell Reports, 30 (11). pp. 3691-3698. ISSN 2211-1247. PMCID PMC7147533. https://resolver.caltech.edu/CaltechAUTHORS:20191101-145506688

Challis, Collin and Hori, Acacia and Sampson, Timothy R. et al. (2020) Gut-seeded α-synuclein fibrils promote gut dysfunction and brain pathology specifically in aged mice. Nature Neuroscience, 23 (3). pp. 327-336. ISSN 1097-6256. PMCID PMC7065967. https://resolver.caltech.edu/CaltechAUTHORS:20191209-154036633

Sampson, Timothy R. and Challis, Collin and Jain, Neha et al. (2020) A gut bacterial amyloid promotes α-synuclein aggregation and motor impairment in mice. eLife, 9 . Art. No. e53111. ISSN 2050-084X. PMCID PMC7012599. https://resolver.caltech.edu/CaltechAUTHORS:20200218-134259315

Sharma, Saransh and Ding, Grace and Telikicherla, Aditya et al. (2020) 3D Surgical Alignment with 100µm Resolution Using Magnetic-Field Gradient-Based Localization. In: 2020 IEEE International Solid-State Circuits Conference. IEEE , Piscataway, NJ, pp. 318-320. ISBN 9781728132051. https://resolver.caltech.edu/CaltechAUTHORS:20200417-102219007

2019

Chen, Sisi and Park, Jong H. and Jiang, Jialong et al. (2019) Designing signaling environments to steer transcriptional diversity in neural progenitor cell populations. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20200102-083334191

Patriarchi, Tommaso and Cho, Jounhong Ryan and Merten, Katharina et al. (2019) Imaging neuromodulators with high spatiotemporal resolution using genetically encoded indicators. Nature Protocols, 14 (12). pp. 3471-3505. ISSN 1754-2189. https://resolver.caltech.edu/CaltechAUTHORS:20190801-132221928

Bedbrook, Claire N. and Yang, Kevin K. and Robinson, J. Elliott et al. (2019) Machine learning-guided channelrhodopsin engineering enables minimally-invasive optogenetics. Nature Methods, 16 (11). pp. 1176-1184. ISSN 1548-7091. PMCID PMC6858556. https://resolver.caltech.edu/CaltechAUTHORS:20190304-085432637

Hofstra, Julie L. and Poremba, Kelsey E. and Shimozono, Alex M. et al. (2019) Nickel-Catalyzed Conversion of Enol Triflates into Alkenyl Halides. Angewandte Chemie International Edition, 58 (42). pp. 14901-14905. ISSN 1433-7851. https://resolver.caltech.edu/CaltechAUTHORS:20190805-134105383

Farhadi, Arash and Ho, Gabrielle H. and Sawyer, Daniel P. et al. (2019) Ultrasound Imaging of Gene Expression in Mammalian Cells. Science, 365 (6460). pp. 1469-1475. ISSN 0036-8075. PMCID PMC6860372. https://resolver.caltech.edu/CaltechAUTHORS:20190319-072910559

Han, Arthur and Tao, Yujia and Reisman, Sarah E. (2019) A 16-step synthesis of the isoryanodane diterpene (+)-perseanol. Nature, 573 (7775). pp. 563-567. ISSN 0028-0836. PMCID PMC7123484. https://resolver.caltech.edu/CaltechAUTHORS:20190610-080930538

Robinson, J. Elliott and Coughlin, Gerard M. and Hori, Acacia M. et al. (2019) Optical dopamine monitoring with dLight1 reveals mesolimbic phenotypes in a mouse model of neurofibromatosis type 1. eLife, 8 . Art. No. e48983. ISSN 2050-084X. PMCID PMC6819083. https://resolver.caltech.edu/CaltechAUTHORS:20190930-133756080

Oikonomou, Grigorios and Altermatt, Michael and Zhang, Rong-wei et al. (2019) The Serotonergic Raphe Promote Sleep in Zebrafish and Mice. Neuron, 103 (4). pp. 686-701. ISSN 0896-6273. PMCID PMC6706304. https://resolver.caltech.edu/CaltechAUTHORS:20190624-113552525

Ross, Tyler D. and Lee, Heun Jin and Qu, Zijie et al. (2019) Controlling Organization and Forces in Active Matter Through Optically-Defined Boundaries. Nature, 572 (7768). pp. 224-229. ISSN 0028-0836. https://resolver.caltech.edu/CaltechAUTHORS:20190102-092232993

DeLano, Travis J. and Reisman, Sarah E. (2019) Enantioselective Electroreductive Coupling of Alkenyl and Benzyl Halides via Nickel Catalysis. ACS Catalysis, 9 (8). pp. 6751-6754. ISSN 2155-5435. PMCID PMC7190267. https://resolver.caltech.edu/CaltechAUTHORS:20190625-112222475

Lin, Daniel H. and Hoelz, André (2019) The Structure of the Nuclear Pore Complex (An Update). Annual Review of Biochemistry, 88 . pp. 725-783. ISSN 0066-4154. PMCID PMC6588426. https://resolver.caltech.edu/CaltechAUTHORS:20190325-111006962

Sharon, Gil and Cruz, Nikki Jamie and Kang, Dae-Wook et al. (2019) Human Gut Microbiota from Autism Spectrum Disorder Promote Behavioral Symptoms in Mice. Cell, 177 (6). pp. 1600-1618. ISSN 0092-8674. PMCID PMC6993574. https://resolver.caltech.edu/CaltechAUTHORS:20190530-084504199

Bar-Zion, Avinoam and Nourmahnad, Atousa and Mittelstein, David R. et al. (2019) Acoustically Detonated Biomolecules for Genetically Encodable Inertial Cavitation. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20190429-085425670

Rajendran, Pradeep S. and Challis, Rosemary C. and Fowlkes, Charless C. et al. (2019) Identification of peripheral neural circuits that regulate heart rate using optogenetic and viral vector strategies. Nature Communications, 10 . Art. No. 1944. ISSN 2041-1723. PMCID PMC6486614. https://resolver.caltech.edu/CaltechAUTHORS:20181107-092306925

Zeng, Jianxiong and Wang, Yaoming and Luo, Zhifei et al. (2019) TRIM9-Mediated Resolution of Neuroinflammation Confers Neuroprotection upon Ischemic Stroke in Mice. Cell Reports, 27 (2). pp. 549-560. ISSN 2211-1247. PMCID PMC6485958. https://resolver.caltech.edu/CaltechAUTHORS:20190409-100816489

Jiang, Jialong and Sivak, David A. and Thomson, Matt (2019) Active Learning of Spin Network Models. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20190520-085022351

Lee, Jeong Oen and Narasimhan, Vinayak and Balakrishna, Ashwin et al. (2019) Fabry-Pérot optical sensor and portable detector for monitoring high-resolution ocular hemodynamics. IEEE Photonics Technology Letters, 31 (6). pp. 423-426. ISSN 1041-1135. https://resolver.caltech.edu/CaltechAUTHORS:20190207-161026404

Beck, Jordan C. and Lacker, Caitlin R. and Chapman, Lauren M. et al. (2019) A modular approach to prepare enantioenriched cyclobutanes: synthesis of (+)-rumphellaone A. Chemical Science, 10 (8). pp. 2315-2319. ISSN 2041-6520. PMCID PMC6385545. https://resolver.caltech.edu/CaltechAUTHORS:20190104-074958444

Challis, Rosemary C. and Ravindra Kumar, Sripriya and Chan, Ken Y. et al. (2019) Systemic AAV vectors for widespread and targeted gene delivery in rodents. Nature Protocols, 14 (2). pp. 379-414. ISSN 1754-2189. https://resolver.caltech.edu/CaltechAUTHORS:20180816-125507808

Abdel-Haq, Reem and Schlachetzki, Johannes C. M. and Glass, Christopher K. et al. (2019) Microbiome–microglia connections via the gut–brain axis. Journal of Experimental Medicine, 216 (1). pp. 41-59. ISSN 0022-1007. PMCID PMC6314531. https://resolver.caltech.edu/CaltechAUTHORS:20181105-090651605

Shapero, Aubrey and Agarwal, Abhinav and Martinez, Juan Carlos et al. (2019) Wireless Implantable Intraocular Pressure Sensor with Parylene-Oil-Encapsulation and Forward-Angled RF Coil. In: 2019 IEEE 32nd International Conference on Micro Electro Mechanical Systems (MEMS). IEEE , Piscataway, NJ, pp. 21-24. ISBN 9781728116105. https://resolver.caltech.edu/CaltechAUTHORS:20191025-124827181

2018

Griffiths, Jessica A. and Mazmanian, Sarkis K. (2018) Emerging evidence linking the gut microbiome to neurologic disorders. Genome Medicine, 10 . Art. No. 98. ISSN 1756-994X. PMCID PMC6302417. https://resolver.caltech.edu/CaltechAUTHORS:20181221-091725940

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Lin, Daniel H. and Correia, Ana R. and Cai, Sarah W. et al. (2018) Structural and functional analysis of mRNA export regulation by the nuclear pore complex. Nature Communications, 9 . Art. No. 2319. ISSN 2041-1723. PMCID PMC5998080. https://resolver.caltech.edu/CaltechAUTHORS:20180613-104057859

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Chapman, Lauren M. and Beck, Jordan C. and Lacker, Caitlin R. et al. (2018) Evolution of a Strategy for the Enantioselective Total Synthesis of (+)-Psiguadial B. Journal of Organic Chemistry, 83 (11). pp. 6066-6085. ISSN 0022-3263. PMCID PMC5990278. https://resolver.caltech.edu/CaltechAUTHORS:20180507-092121998

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Narasimhan, Vinayak and Siddique, Radwanul Hasan and Lee, Jeong Oen et al. (2018) Multifunctional biophotonic nanostructures inspired by the longtail glasswing butterfly for medical devices. Nature Nanotechnology, 13 (6). pp. 512-519. ISSN 1748-3387. https://resolver.caltech.edu/CaltechAUTHORS:20180214-162837496

Donaldson, G. P. and Ladinsky, M. S. and Yu, K. B. et al. (2018) Gut microbiota utilize immunoglobulin A for mucosal colonization. Science, 360 (6390). pp. 795-800. ISSN 0036-8075. PMCID PMC5973787. https://resolver.caltech.edu/CaltechAUTHORS:20180327-133708907

Lu, George Jiaozhi and Farhadi, Arash and Szablowski, Jerzy O. et al. (2018) Acoustically modulated magnetic resonance imaging of gas-filled protein nanostructures. Nature Materials, 17 (5). pp. 456-463. ISSN 1476-1122. PMCID PMC6015773. https://resolver.caltech.edu/CaltechAUTHORS:20171215-092640151

Gradinaru, Viviana and Treweek, Jennifer and Overton, Kristin et al. (2018) Hydrogel-Tissue Chemistry: Principles and Applications. Annual Review of Biophysics, 47 . pp. 355-376. ISSN 1936-122X. PMCID PMC6359929. https://resolver.caltech.edu/CaltechAUTHORS:20180529-083813817

Needham, Brittany D. and Tang, Weiyi and Wu, Wei-Li (2018) Searching for the gut microbial contributing factors to social behavior in rodent models of autism spectrum disorder. Developmental Neurobiology, 78 (5). pp. 474-499. ISSN 1932-8451. https://resolver.caltech.edu/CaltechAUTHORS:20180207-090527147

Han, Samuel J. and Park, Haeri and Lee, Jeong Oen et al. (2018) Effect of optical aberrations on intraocular pressure measurements using a microscale optical implant in ex vivo rabbit eyes. Journal of Biomedical Optics, 23 (4). Art. No. 047002. ISSN 1083-3668. https://resolver.caltech.edu/CaltechAUTHORS:20180416-143006166

Wang, Taige and Shoaran, Mahsa and Emami, Azita (2018) Towards Adaptive Deep Brain Stimulation in Parkinson's Disease: Lfp-Based Feature Analysis and Classification. In: 2018 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP). IEEE , Piscataway, NJ, pp. 2536-2540. ISBN 978-1-5386-4658-8. https://resolver.caltech.edu/CaltechAUTHORS:20180920-111853534

Agarwal, Abhinav and Shapero, Aubrey and Rodger, Damien et al. (2018) A wireless, low-drift, implantable intraocular pressure sensor with parylene-on-oil encapsulation. In: 2018 IEEE Custom Integrated Circuits Conference (CICC). IEEE , Piscataway, NJ, pp. 1-4. ISBN 978-1-5386-2483-8. https://resolver.caltech.edu/CaltechAUTHORS:20180518-135417850

Skubák, Pavol and Araç, Demet and Bowler, Matthew W. et al. (2018) A new MR-SAD algorithm for the automatic building of protein models from low-resolution X-ray data and a poor starting model. IUCrJ, 5 (2). pp. 166-171. ISSN 2052-2525. PMCID PMC5947721. https://resolver.caltech.edu/CaltechAUTHORS:20180411-135404320

Robinson, J. Elliott and Gradinaru, Viviana (2018) Dopaminergic dysfunction in neurodevelopmental disorders: recent advances and synergistic technologies to aid basic research. Current Opinion in Neurobiology, 48 . pp. 17-29. ISSN 0959-4388. PMCID PMC5825239. https://resolver.caltech.edu/CaltechAUTHORS:20170918-075519928

Farney, Elliot P. and Feng, Sean S. and Schäfers, Felix et al. (2018) Total Synthesis of (+)-Pleuromutilin. Journal of the American Chemical Society, 140 (4). pp. 1267-1270. ISSN 0002-7863. PMCID PMC5988231. https://resolver.caltech.edu/CaltechAUTHORS:20180112-131323403

Cho, Hyunjun and Kumar, Shailabh and Yang, Daejong et al. (2018) Surface-Enhanced Raman Spectroscopy-Based Label-Free Insulin Detection at Physiological Concentrations for Analysis of Islet Performance. ACS Sensors, 3 (1). pp. 65-71. ISSN 2379-3694. https://resolver.caltech.edu/CaltechAUTHORS:20180112-131323127

Hofstra, Julie L. and Cherney, Alan H. and Ordner, Ciara M. et al. (2018) Synthesis of Enantioenriched Allylic Silanes via Nickel-Catalyzed Reductive Cross-Coupling. Journal of the American Chemical Society, 140 (1). pp. 139-142. ISSN 0002-7863. PMCID PMC5851001. https://resolver.caltech.edu/CaltechAUTHORS:20171205-112031343

Davis, Hunter C. and Ramesh, Pradeep and Bhatnagar, Aadyot et al. (2018) Mapping the microscale origins of magnetic resonance image contrast with subcellular diamond magnetometry. Nature Communications, 9 . Art. No. 131. ISSN 2041-1723. PMCID PMC5760582. https://resolver.caltech.edu/CaltechAUTHORS:20161205-095517669

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2017

Ruan, Haowen and Brake, Joshua and Robinson, J. Elliott et al. (2017) Deep tissue optical focusing and optogenetic modulation with time-reversed ultrasonically encoded light. Science Advances, 3 (12). Art. No. eaao5520. ISSN 2375-2548. PMCID PMC5722648. https://resolver.caltech.edu/CaltechAUTHORS:20171107-132336726

Kim, Kun Ho and Lee, Jeong Oen and Du, Juan et al. (2017) Real-Time In Vivo Intraocular Pressure Monitoring using an Optomechanical Implant and an Artificial Neural Network. IEEE Sensors Journal, 17 (22). pp. 7394-7404. ISSN 1530-437X. PMCID PMC5798645. https://resolver.caltech.edu/CaltechAUTHORS:20171012-103313071

Mukherjee, Arnab and Davis, Hunter C. and Ramesh, Pradeep et al. (2017) Biomolecular MRI reporters: Evolution of new mechanisms. Progress in Nuclear Magnetic Resonance Spectroscopy, 102-103 . pp. 32-42. ISSN 0079-6565. PMCID PMC5726449. https://resolver.caltech.edu/CaltechAUTHORS:20170619-073109351

Bedbrook, Claire N. and Yang, Kevin K. and Rice, Austin J. et al. (2017) Machine learning to design integral membrane channelrhodopsins for efficient eukaryotic expression and plasma membrane localization. PLOS Computational Biology, 13 (10). Art. No. e1005786. ISSN 1553-7358. PMCID PMC5695628. https://resolver.caltech.edu/CaltechAUTHORS:20171030-140148566

Nath, Ravi D. and Bedbrook, Claire N. and Abrams, Michael J. et al. (2017) The Jellyfish Cassiopea Exhibits a Sleep-like State. Current Biology, 27 (19). pp. 2984-2990. ISSN 0960-9822. PMCID PMC5653286. https://resolver.caltech.edu/CaltechAUTHORS:20170921-075913502

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Cekanaviciute, Egle and Yoo, Bryan B. and Runia, Tessel F. et al. (2017) Gut bacteria from multiple sclerosis patients modulate human T cells and exacerbate symptoms in mouse models. Proceedings of the National Academy of Sciences of the United States of America, 114 (40). pp. 10713-10718. ISSN 0027-8424. PMCID PMC5635915; PMC5651795. https://resolver.caltech.edu/CaltechAUTHORS:20170914-194648747

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Greenbaum, Alon and Jang, Min J. and Challis, Collin et al. (2017) Q&A: How can advances in tissue clearing and optogenetics contribute to our understanding of normal and diseased biology? BMC Biology, 15 . Art. No. 87. ISSN 1741-7007. PMCID PMC5613628. https://resolver.caltech.edu/CaltechAUTHORS:20170926-130537624

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Kowarsch, Robert and Janzen, Jürgen and Cho, Hyunjun et al. (2017) Scanning confocal vibrometer microscope for vibration analysis of energy-harvesting MEMS in wearables. Technisches Messen, 84 (S1). S131-S137. ISSN 0171-8096. https://resolver.caltech.edu/CaltechAUTHORS:20171017-083418786

Edelblum, Karen L. and Sharon, Gil and Singh, Gurminder et al. (2017) The microbiome activates CD4 T-cell-mediated immunity to compensate for increased intestinal permeability. Cellular and Molecular Gastroenterology and Hepatology, 4 (2). pp. 285-297. ISSN 2352-345X. PMCID PMC5540699. https://resolver.caltech.edu/CaltechAUTHORS:20170628-091947434

Chan, Ken Y. and Jang, Min J. and Yoo, Bryan B. et al. (2017) Engineered AAVs for efficient noninvasive gene delivery to the central and peripheral nervous systems. Nature Neuroscience, 20 (8). pp. 1172-1179. ISSN 1097-6256. PMCID PMC5529245. https://resolver.caltech.edu/CaltechAUTHORS:20170626-152125765

Maley, Adam M. and Lu, George J. and Shapiro, Mikhail G. et al. (2017) Characterizing Single Polymeric and Protein Nanoparticles with Surface Plasmon Resonance Imaging Measurements. ACS Nano, 11 (7). pp. 7447-7456. ISSN 1936-0851. PMCID PMC5531002. https://resolver.caltech.edu/CaltechAUTHORS:20170711-140321159

Koo, Sukmo and Siddique, Radwanul Hasan and Choo, Hyuck (2017) Quantitative analysis of a III-V tapered horn-shaped metal-clad nano-cavity as an on-chip light source. AIP Advances, 7 (7). Art. No. 075017. ISSN 2158-3226. https://resolver.caltech.edu/CaltechAUTHORS:20170801-095250011

Cho, Jounhong Ryan and Treweek, Jennifer B. and Robinson, J. Elliott et al. (2017) Dorsal Raphe Dopamine Neurons Modulate Arousal and Promote Wakefulness by Salient Stimuli. Neuron, 94 (6). pp. 1205-1219. ISSN 0896-6273. https://resolver.caltech.edu/CaltechAUTHORS:20170609-094413808

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Yang, Daejong and Cho, Hyunjun and Koo, Sukmo et al. (2017) Simple, Large-Scale Fabrication of Uniform Raman-Enhancing Substrate with Enhancement Saturation. ACS Applied Materials & Interfaces, 9 (22). pp. 19092-19101. ISSN 1944-8244. https://resolver.caltech.edu/CaltechAUTHORS:20170501-090908942

Huber, Ferdinand M. and Greenblatt, Sarah M. and Davenport, Andrew M. et al. (2017) Histone-Binding of DPF2 Mediates Its Repressive Role in Myeloid Differentiation. Proceedings of the National Academy of Sciences of the United States of America, 114 (23). pp. 6016-6021. ISSN 0027-8424. PMCID PMC5468650. https://resolver.caltech.edu/CaltechAUTHORS:20170522-112731942

Narasimhan, Vinayak and Lee, Jeong Oen and Du, Juan et al. (2017) Black silicon as a multifunctional material for medical implants: First demonstrated use in in-vivo intraocular pressure sensing. In: 2017 19th International Conference on Solid-State Sensors, Actuators and Microsystems (TRANSDUCERS). IEEE , Piscataway, NJ, pp. 387-390. ISBN 978-1-5386-2732-7. https://resolver.caltech.edu/CaltechAUTHORS:20180105-095739798

Gilad, Assaf A. and Shapiro, Mikhail G. (2017) Molecular Imaging in Synthetic Biology, and Synthetic Biology in Molecular Imaging. Molecular Imaging and Biology, 19 (3). pp. 373-378. ISSN 1536-1632. PMCID PMC6058969. https://resolver.caltech.edu/CaltechAUTHORS:20170227-101317014

Allen, William E. and Kauvar, Isaac V. and Chen, Michael Z. et al. (2017) Global Representations of Goal-Directed Behavior in Distinct Cell Types of Mouse Neocortex. Neuron, 94 (4). pp. 891-907. ISSN 0896-6273. PMCID PMC5723385. https://resolver.caltech.edu/CaltechAUTHORS:20170522-103736207

Wu, Wei-Li and Hsiao, Elaine Y. and Yan, Zihao et al. (2017) The Placental Interleukin-6 Signaling Controls Fetal Brain Development and Behavior. Brain, Behavior, and Immunity, 62 . pp. 11-23. ISSN 0889-1591. PMCID PMC5373986. https://resolver.caltech.edu/CaltechAUTHORS:20161114-135126065

Greenbaum, Alon and Chan, Ken Y. and Dobreva, Tatyana et al. (2017) Bone CLARITY: Clearing, imaging, and computational analysis of osteoprogenitors within intact bone marrow. Science Translational Medicine, 9 (387). Art. No. eaah6518. ISSN 1946-6234. https://resolver.caltech.edu/CaltechAUTHORS:20161221-135116035

Xu, Chen and Han, Arthur and Virgil, Scott C. et al. (2017) Chemical Synthesis of (+)-Ryanodine and (+)-20-Deoxyspiganthine. ACS Central Science, 3 (4). pp. 278-282. ISSN 2374-7943. PMCID PMC5409222. https://resolver.caltech.edu/CaltechAUTHORS:20170310-084018084

Poremba, Kelsey E. and Kadunce, Nathaniel T. and Suzuki, Naoyuki et al. (2017) Nickel-Catalyzed Asymmetric Reductive Cross-Coupling To Access 1,1-Diarylalkanes. Journal of the American Chemical Society, 139 (16). pp. 5684-5687. ISSN 0002-7863. PMCID PMC5851002. https://resolver.caltech.edu/CaltechAUTHORS:20170414-064225830

Wang, Haoxuan and Regan, Clinton J. and Codelli, Julian A. et al. (2017) Enantioselective Synthesis of (−)-Acetylapoaranotin. Organic Letters, 19 (7). pp. 1698-1701. ISSN 1523-7060. PMCID PMC5387676. https://resolver.caltech.edu/CaltechAUTHORS:20170329-093225716

Lee, Jeong Oen and Narasimhan, Vinayak and Du, Juan et al. (2017) Biocompatible Multifunctional Black-Silicon for Implantable Intraocular Sensor. Advanced Healthcare Materials, 6 (4). Art. No. 1601356. ISSN 2192-2640. https://resolver.caltech.edu/CaltechAUTHORS:20170117-075403634

Maresca, David and Lakshmanan, Anupama and Lee-Gosselin, Audrey et al. (2017) Nonlinear ultrasound imaging of nanoscale acoustic biomolecules. Applied Physics Letters, 110 (7). Art. No. 073704. ISSN 0003-6951. PMCID PMC5315666. https://resolver.caltech.edu/CaltechAUTHORS:20170221-114609641

Huber, Ferdinand M. and Hoelz, André (2017) Molecular basis for protection of ribosomal protein L4 from cellular degradation. Nature Communications, 8 . Art. No. 14354. ISSN 2041-1723. PMCID PMC5296656. https://resolver.caltech.edu/CaltechAUTHORS:20170202-153010885

Barskiy, Danila A. and Coffey, Aaron M and Nikolaou, Panayiotis et al. (2017) NMR Hyperpolarization Techniques of Gases. Chemistry: a European Journal, 23 (4). pp. 725-751. ISSN 0947-6539. PMCID PMC5462469. https://resolver.caltech.edu/CaltechAUTHORS:20161018-095718409

Magley, Daniel L. and Narasimhan, Vinayak and Choo, Hyuck (2017) Hydro-ionic microthruster for locomotion in low-Reynold's number ionic fluids. In: IEEE 30th International Conference on Micro Electro Mechanical Systems. IEEE , Piscataway, NJ, pp. 773-776. ISBN 978-1-5090-5078-9. https://resolver.caltech.edu/CaltechAUTHORS:20170303-104552700

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2016

Mukherjee, Arnab and Wu, Di and Davis, Hunter C. et al. (2016) Non-invasive imaging using reporter genes altering cellular water permeability. Nature Communications, 7 . Art. No. 13891. ISSN 2041-1723. PMCID PMC5196229. https://resolver.caltech.edu/CaltechAUTHORS:20161222-161549671

Mazmanian, Sarkis K. and Sampson, Timothy R. and Debelius, Justine W. et al. (2016) Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson’s Disease. Cell, 167 (6). pp. 1469-1480. ISSN 0092-8674. PMCID PMC5718049. https://resolver.caltech.edu/CaltechAUTHORS:20161115-114016210

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Sharon, Gil and Sampson, Timothy R. and Geschwind, Daniel H. et al. (2016) The Central Nervous System and the Gut Microbiome. Cell, 167 (4). pp. 915-932. ISSN 0092-8674. PMCID PMC5127403. https://resolver.caltech.edu/CaltechAUTHORS:20161107-090306622

DePas, William H. and Starwalt-Lee, Ruth and Van Sambeek, Lindsey et al. (2016) Exposing the Three-Dimensional Biogeography and Metabolic States of Pathogens in Cystic Fibrosis Sputum via Hydrogel Embedding, Clearing, and rRNA Labeling. mBio, 7 (5). e00796-16. ISSN 2150-7511. PMCID PMC5040109. https://resolver.caltech.edu/CaltechAUTHORS:20160927-144217261

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Chapman, Lauren M. and Beck, Jordan C. and Wu, Linglin et al. (2016) Enantioselective Total Synthesis of (+)-Psiguadial B. Journal of the American Chemical Society, 138 (31). pp. 9803-9806. ISSN 0002-7863. https://resolver.caltech.edu/CaltechAUTHORS:20160815-142455841

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Treweek, Jennifer Brooke and Gradinaru, Viviana (2016) Extracting structural and functional features of widely distributed biological circuits with single cell resolution via tissue clearing and delivery vectors. Current Opinion in Biotechnology, 40 . pp. 193-207. ISSN 0958-1669. PMCID PMC4975678. https://resolver.caltech.edu/CaltechAUTHORS:20160712-101339180

Xiao, Cheng and Cho, Jounhong Ryan and Zhou, Chunyi et al. (2016) Cholinergic Mesopontine Signals Govern Locomotion and Reward through Dissociable Midbrain Pathways. Neuron, 90 (2). pp. 333-347. ISSN 0896-6273. PMCID PMC4840478. https://resolver.caltech.edu/CaltechAUTHORS:20160420-090626768

Cho, Hyunjun and Balakrishna, Ashwin and Mao, Yuan et al. (2016) Efficient power generation from vocal folds vibrations for medical electronic implants. In: 29th International Conference on Micro Electro Mechanical Systems (MEMS), 2016. IEEE , Piscataway, NJ, pp. 363-366. ISBN 978-1-5090-1973-1. https://resolver.caltech.edu/CaltechAUTHORS:20161013-105036063

2015

Sampson, Timothy R. and Mazmanian, Sarkis K. (2015) Control of Brain Development, Function and Behavior by the Microbiome. Cell Host & Microbe, 17 (5). pp. 565-576. ISSN 1931-3128. PMCID PMC4442490. https://resolver.caltech.edu/CaltechAUTHORS:20150518-143833374