Items where Research Group Name is "Rosen Bioengineering Center"
Number of items: 98. 2023Shirzaei Sani, Ehsan and Xu, Changhao and Wang, Canran et al. (2023) A stretchable wireless wearable bioelectronic system for multiplexed monitoring and combination treatment of infected chronic wounds. Science Advances, 9 (12). Art. No. eadf7388. ISSN 2375-2548. PMCID PMC10038347. doi:10.1126/sciadv.adf7388. https://resolver.caltech.edu/CaltechAUTHORS:20230328-625234000.1 Haloi, Nandan and Huang, Shan and Nichols, Aaron N. et al. (2023) Interactive computational and experimental approaches improve the sensitivity of periplasmic binding protein-based nicotine biosensors for measurements in biofluids. . doi:10.1101/2023.01.16.524298. (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20230316-182493000.35 2022Abdel-Haq, Reem and Schlachetzki, Johannes C. M. and Boktor, Joseph C. et al. (2022) A prebiotic diet modulates microglial states and motor deficits in α-synuclein overexpressing mice. eLife, 11 . Art. No. e81453. ISSN 2050-084X. PMCID PMC9668333. doi:10.7554/elife.81453. https://resolver.caltech.edu/CaltechAUTHORS:20221202-906989500.8 Abdel-Haq, Reem and Schlachetzki, Johannes C. M. and Boktor, Joseph C. et al. (2022) A prebiotic diet modulates microglial states and motor deficits in α-synuclein overexpressing mice. . doi:10.1101/2022.06.27.497828. (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20220706-965670000 Greenwald, Noah F. and Miller, Geneva and Moen, Erick et al. (2022) Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning. Nature Biotechnology, 40 (4). pp. 555-565. ISSN 1087-0156. PMCID PMC9010346. doi:10.1038/s41587-021-01094-0. https://resolver.caltech.edu/CaltechAUTHORS:20210303-070232817 Winnett, Alexander Viloria and Porter, Michael K. and Romano, Anna E. et al. (2022) Morning SARS-CoV-2 testing yields better detection of infection due to higher viral loads in saliva and nasal swabs upon waking. . doi:10.1101/2022.03.02.22271724. (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20220307-188444000 Shen, Cheng and Zhou, Haowen and Yang, Changhuei (2022) Non-interferometric and non-iterative complex wave-field reconstruction based on Kramers-Kronig relations. In: Quantitative Phase Imaging VIII. Proceedings of SPIE. No.11970. Society of Photo-optical Instrumentation Engineers , Bellingham, WA, Art. No. 1197002. https://resolver.caltech.edu/CaltechAUTHORS:20220304-60849000 Shen, Cheng and Lamba, Adiyant and Zhu, Meng et al. (2022) Stain-free detection of embryo polarization using deep learning. Scientific Reports, 12 . Art. No. 2404. ISSN 2045-2322. doi:10.1038/s41598-022-05990-6. https://resolver.caltech.edu/CaltechAUTHORS:20220215-496417800 Savela, Emily S. and Winnett, Alexander Viloria and Romano, Anna E. et al. (2022) Quantitative SARS-CoV-2 Viral-Load Curves in Paired Saliva Samples and Nasal Swabs Inform Appropriate Respiratory Sampling Site and Analytical Test Sensitivity Required for Earliest Viral Detection. Journal of Clinical Microbiology, 60 (2). Art. No. e01785-21. ISSN 0095-1137. PMCID PMC8849374; PMC8043477. doi:10.1128/JCM.01785-21. https://resolver.caltech.edu/CaltechAUTHORS:20210407-080559241 Ramachandran, Karthik and Shao, Zixuan and Di Luccio, Tiziana et al. (2022) Tungsten disulfide nanotubes enhance flow-induced crystallization and radio-opacity of polylactide without adversely affecting in vitro toxicity. Acta Biomaterialia, 138 . pp. 313-326. ISSN 1742-7061. doi:10.1016/j.actbio.2021.11.005. https://resolver.caltech.edu/CaltechAUTHORS:20211202-230941847 Wang, Canran and Shirzaei Sani, Ehsan and Gao, Wei (2022) Wearable Bioelectronics for Chronic Wound Management. Advanced Functional Materials, 32 (17). Art. No. 2111022. ISSN 1616-301X. doi:10.1002/adfm.202111022. https://resolver.caltech.edu/CaltechAUTHORS:20220113-922790233 2021Huang, Shan and Wang, Kaihang and Mayo, Stephen L. (2021) Genome manipulation by guide-directed Argonaute cleavage. . doi:10.1101/2021.11.17.469050. (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20211122-174116390 Barlow, Jacob T. and Leite, Gabriela and Romano, Anna E. et al. (2021) Quantitative sequencing clarifies the role of disruptor taxa, oral microbiota, and strict anaerobes in the human small-intestine microbiome. Microbiome, 9 . Art. No. 214. ISSN 2049-2618. PMCID PMC8561862; PMC7338468. doi:10.1186/s40168-021-01162-2. https://resolver.caltech.edu/CaltechAUTHORS:20211110-202208524 Kim, Gunho and Portela, Carlos M. and Celli, Paolo et al. (2021) Poroelastic microlattices for underwater wave focusing. Extreme Mechanics Letters, 49 . Art. No. 101499. ISSN 2352-4316. doi:10.1016/j.eml.2021.101499. https://resolver.caltech.edu/CaltechAUTHORS:20211102-204833333 Belliveau, Nathan M. and Chure, Griffin and Hueschen, Christina L. et al. (2021) Fundamental limits on the rate of bacterial growth and their influence on proteomic composition. Cell Systems, 12 (9). pp. 924-944. ISSN 2405-4712. PMCID PMC8460600. doi:10.1016/j.cels.2021.06.002. https://resolver.caltech.edu/CaltechAUTHORS:20201021-080615473 Qu, Zijie and Schildknecht, Dominik and Shadkhoo, Shahriar et al. (2021) Persistent fluid flows defined by active matter boundaries. Communications Physics, 4 . Art. No. 198. ISSN 2399-3650. doi:10.1038/s42005-021-00703-3. https://resolver.caltech.edu/CaltechAUTHORS:20201110-143708446 Tsypin, Lev M. and Newman, Dianne K. (2021) Nitrate Reduction Stimulates and Is Stimulated by Phenazine-1-Carboxylic Acid Oxidation by Citrobacter portucalensis MBL. mBio, 12 (4). Art. No. e02265-21. ISSN 2150-7511. doi:10.1128/mBio.02265-21. https://resolver.caltech.edu/CaltechAUTHORS:20210607-115053770 Shen, Cheng and Liang, Mingshu and Pan, An et al. (2021) Non-iterative complex wave-field reconstruction based on Kramers–Kronig relations. Photonics Research, 9 (6). pp. 1003-1012. ISSN 2327-9125. doi:10.1364/PRJ.419886. https://resolver.caltech.edu/CaltechAUTHORS:20200624-100741522 Hochrein, Lisa M. and Li, Heyun and Pierce, Niles A. (2021) High-Performance Allosteric Conditional Guide RNAs for Mammalian Cell-Selective Regulation of CRISPR/Cas. ACS Synthetic Biology, 10 (5). pp. 964-971. ISSN 2161-5063. doi:10.1021/acssynbio.1c00037. https://resolver.caltech.edu/CaltechAUTHORS:20210503-115702708 Buss, Marjorie T. and Ramesh, Pradeep and English, Max Atticus et al. (2021) Spatial Control of Probiotic Bacteria in the Gastrointestinal Tract Assisted by Magnetic Particles. Advanced Materials, 33 (17). Art. No. 2007473. ISSN 0935-9648. doi:10.1002/adma.202007473. https://resolver.caltech.edu/CaltechAUTHORS:20210315-102208370 Laccetti, Benjamin and Kornfield, Julia (2021) Ballistic delivery of compounds to inner layers of the cornea is limited by tough mechanical properties of stromal tissue. Journal of the Mechanical Behavior of Biomedical Materials, 115 . Art. No. 104246. ISSN 1751-6161. doi:10.1016/j.jmbbm.2020.104246. https://resolver.caltech.edu/CaltechAUTHORS:20201208-105038922 Zheng, Guoan and Shen, Cheng and Jiang, Shaowei et al. (2021) Concept, implementations and applications of Fourier ptychography. Nature Reviews Physics, 3 (3). pp. 207-223. ISSN 2522-5820. doi:10.1038/s42254-021-00280-y. https://resolver.caltech.edu/CaltechAUTHORS:20210210-120447617 Qu, Zijie and Jiang, Jialong and Lee, Heun Jin et al. (2021) Programming Boundary Deformation Patterns in Active Networks. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20210217-132137942 Morrison, Muir and Razo-Mejia, Manuel and Phillips, Rob (2021) Reconciling kinetic and thermodynamic models of bacterial transcription. PLOS Computational Biology, 17 (1). Art. No. e1008572. ISSN 1553-7358. PMCID PMC7845990. doi:10.1371/journal.pcbi.1008572. https://resolver.caltech.edu/CaltechAUTHORS:20200615-130249775 Bannon, Dylan and Moen, Erick and Schwartz, Morgan et al. (2021) DeepCell Kiosk: scaling deep learning–enabled cellular image analysis with Kubernetes. Nature Methods, 18 (1). pp. 43-45. ISSN 1548-7091. https://resolver.caltech.edu/CaltechAUTHORS:20190916-101510993 Xu, Jian and Jahromi, Ali K. and Yang, Changhuei (2021) Diffusing wave spectroscopy: A unified treatment on temporal sampling and speckle ensemble methods. APL Photonics, 6 (1). Art. No. 016105. ISSN 2378-0967. doi:10.1063/5.0034576. https://resolver.caltech.edu/CaltechAUTHORS:20210105-133437784 2020Winnett, Alexander and Cooper, Matthew M. and Shelby, Natasha et al. (2020) SARS-CoV-2 Viral Load in Saliva Rises Gradually and to Moderate Levels in Some Humans. . doi:10.1101/2020.12.09.20239467. (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20201211-113537700 Tsypin, Lev M. and Newman, Dianne K. (2020) Bidirectional redox cycling of phenazine-1-carboxylic acid by Citrobacter portucalensis MBL drives increased nitrate reduction. . doi:10.1101/2020.11.23.395335. (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20201124-104632686 Wu, Zhiguang and Chen, Ye and Mukasa, Daniel et al. (2020) Medical micro/nanorobots in complex media. Chemical Society Reviews, 49 (22). pp. 8088-8112. ISSN 0306-0012. doi:10.1039/d0cs00309c. https://resolver.caltech.edu/CaltechAUTHORS:20200706-101709396 Merk, Liana N. and Shur, Andrey S. and Pandey, Ayush et al. (2020) Engineering Logical Inflammation Sensing Circuit for Modulating Gut Conditions. . doi:10.1101/2020.11.10.377085. (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20201111-100159834 Trivedi, Vikas and Madaan, Sara and Holland, Daniel B. et al. (2020) Imaging the Beating Heart with Macroscopic Phase Stamping. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20210111-160848952 Cua, Michelle and Martin, Daniel and Meza, Patricia et al. (2020) Method to Determine Syringe Silicone Oil Layer Heterogeneity and Investigation of its Impact on Product Particle Counts. Journal of Pharmaceutical Sciences, 109 (11). pp. 3292-3299. ISSN 0022-3549. PMCID PMC7572663. doi:10.1016/j.xphs.2020.07.012. https://resolver.caltech.edu/CaltechAUTHORS:20200715-152735840 Rabut, Claire and Yoo, Sangjin and Hurt, Robert C. et al. (2020) Ultrasound Technologies for Imaging and Modulating Neural Activity. Neuron, 108 (1). pp. 93-110. ISSN 0896-6273. doi:10.1016/j.neuron.2020.09.003. https://resolver.caltech.edu/CaltechAUTHORS:20201019-101559925 Saunders, Scott H. and Tse, Edmund C. M. and Yates, Matthew D. et al. (2020) Extracellular DNA Promotes Efficient Extracellular Electron Transfer by Pyocyanin in Pseudomonas aeruginosa Biofilms. Cell, 182 (4). pp. 919-932. ISSN 0092-8674. PMCID PMC7457544. https://resolver.caltech.edu/CaltechAUTHORS:20191213-144717393 Razo-Mejia, Manuel and Marzen, Sarah and Chure, Griffin et al. (2020) First-principles prediction of the information processing capacity of a simple genetic circuit. Physical Review E, 102 (2). Art. No. 022404. ISSN 2470-0045. https://resolver.caltech.edu/CaltechAUTHORS:20190402-080512452 Ruan, Haowen and Liu, Yan and Xu, Jian et al. (2020) Fluorescence imaging through dynamic scattering media with speckle-encoded ultrasound-modulated light correlation. Nature Photonics, 14 (8). pp. 511-516. ISSN 1749-4885. doi:10.1038/s41566-020-0630-0. https://resolver.caltech.edu/CaltechAUTHORS:20200324-095704695 Quintero-Cadena, Porfirio and Lenstra, Tineke L. and Sternberg, Paul W. (2020) RNA Pol II Length and Disorder Enable Cooperative Scaling of Transcriptional Bursting. Molecular Cell, 79 (2). pp. 207-220. ISSN 1097-2765. https://resolver.caltech.edu/CaltechAUTHORS:20191031-131636300 Barlow, Jacob T. and Bogatyrev, Said R. and Ismagilov, Rustem F. (2020) A Quantitative Sequencing Framework for Absolute Abundance Measurements of Mucosal and Lumenal Microbial Communities. Nature Communications, 11 . Art. No. 2590. ISSN 2041-1723. PMCID PMC7244552; PMC7338468. https://resolver.caltech.edu/CaltechAUTHORS:20200303-103834329 Xu, Jian and Cao, Ruizhi and Cua, Michelle et al. (2020) Single-shot surface 3D imaging by optical coherence factor. Optics Letters, 45 (7). pp. 1734-1737. ISSN 0146-9592. doi:10.1364/ol.384551. https://resolver.caltech.edu/CaltechAUTHORS:20200416-121840939 Min, Jihong and Yang, Yiran and Wu, Zhiguang et al. (2020) Robotics in the Gut. Advanced Therapeutics, 3 (4). Art. No. 1900125. ISSN 2366-3987. doi:10.1002/adtp.201900125. https://resolver.caltech.edu/CaltechAUTHORS:20190917-132535911 Davis, Hunter C. and Kang, Sunghwi and Lee, Jae-Hyun et al. (2020) Nanoscale Heat Transfer from Magnetic Nanoparticles and Ferritin in an Alternating Magnetic Field. Biophysical Journal, 118 (6). pp. 1502-1510. ISSN 0006-3495. PMCID PMC7091488 . doi:10.1016/j.bpj.2020.01.028. https://resolver.caltech.edu/CaltechAUTHORS:20200203-092720672 2019Einav, Tal and Yazdi, Shahrzad and Coey, Aaron et al. (2019) Harnessing Avidity: Quantifying the Entropic and Energetic Effects of Linker Length and Rigidity for Multivalent Binding of Antibodies to HIV-1. Cell Systems, 9 (5). pp. 466-474. ISSN 2405-4712. PMCID PMC6892280. doi:10.1016/j.cels.2019.09.007. https://resolver.caltech.edu/CaltechAUTHORS:20191023-142258650 Song, Yu and Min, Jihong and Gao, Wei (2019) Wearable and Implantable Electronics: Moving toward Precision Therapy. ACS Nano, 13 (11). pp. 12280-12286. ISSN 1936-0851. doi:10.1021/acsnano.9b08323. https://resolver.caltech.edu/CaltechAUTHORS:20191114-134816642 Moen, Erick and Borba, Enrico and Miller, Geneva et al. (2019) Accurate cell tracking and lineage construction in live-cell imaging experiments with deep learning. . doi:10.1101/803205. (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20191014-100546775 Zhukov, Dmitriy V. and Khorosheva, Eugenia M. and Khazaei, Tahmineh et al. (2019) Microfluidic SlipChip device for multistep multiplexed biochemistry on a nanoliter scale. Lab on a Chip, 19 (19). pp. 3200-3211. ISSN 1473-0197. doi:10.1039/c9lc00541b. https://resolver.caltech.edu/CaltechAUTHORS:20190823-090755927 Ramirez-Zamora, Adolfo and Gradinaru, Viviana (2019) Proceedings of the Sixth Deep Brain Stimulation Think Tank Modulation of Brain Networks and Application of Advanced Neuroimaging, Neurophysiology, and Optogenetics. Frontiers in Neuroscience, 13 . Art. No. 936. ISSN 1662-453X. PMCID PMC6751331. doi:10.3389/fnins.2019.00936. https://resolver.caltech.edu/CaltechAUTHORS:20190926-135813898 Chure, Griffin and Razo-Mejia, Manuel and Belliveau, Nathan M. et al. (2019) Predictive shifts in free energy couple mutations to their phenotypic consequences. Proceedings of the National Academy of Sciences of the United States of America, 116 (37). pp. 18275-18284. ISSN 0027-8424. PMCID PMC6744869. doi:10.1073/pnas.1907869116. https://resolver.caltech.edu/CaltechAUTHORS:20190826-153157241 Yang, Kevin K. and Wu, Zachary and Arnold, Frances H. (2019) Machine-learning-guided directed evolution for protein engineering. Nature Methods, 16 (8). pp. 687-694. ISSN 1548-7091. doi:10.1038/s41592-019-0496-6. https://resolver.caltech.edu/CaltechAUTHORS:20190715-092459913 Hanewich-Hollatz, Mikhail H. and Chen, Zhewei and Hochrein, Lisa M. et al. (2019) Conditional Guide RNAs: Programmable Conditional Regulation of CRISPR/Cas Function in Bacterial and Mammalian Cells via Dynamic RNA Nanotechnology. ACS Central Science, 5 (7). pp. 1241-1249. ISSN 2374-7943. PMCID PMC6661866. https://resolver.caltech.edu/CaltechAUTHORS:20190123-124341981 Wu, Zhiguang and Li, Lei and Yang, Yiran et al. (2019) A microrobotic system guided by photoacoustic computed tomography for targeted navigation in intestines in vivo. Science Robotics, 4 (32). Art. No. eaax0613. ISSN 2470-9476. PMCID PMC7337196. doi:10.1126/scirobotics.aax0613. https://resolver.caltech.edu/CaltechAUTHORS:20190724-151755826 Einav, Tal and Phillips, Rob (2019) How the avidity of polymerase binding to the –35/–10 promoter sites affects gene expression. Proceedings of the National Academy of Sciences of the United States of America, 116 (27). pp. 13340-13345. ISSN 0027-8424. PMCID PMC6613100. doi:10.1073/pnas.1905615116. https://resolver.caltech.edu/CaltechAUTHORS:20190405-094702005 Zhang, Juner and Huang, Xiongyi and Zhang, Ruijie K. et al. (2019) Enantiodivergent α-Amino C–H Fluoroalkylation Catalyzed by Engineered Cytochrome P450s. Journal of the American Chemical Society, 141 (25). pp. 9798-9802. ISSN 0002-7863. PMCID PMC6666315. doi:10.1021/jacs.9b04344. https://resolver.caltech.edu/CaltechAUTHORS:20190607-130827085 Chure, Griffin and Razo-Mejia, Manuel and Belliveau, Nathan M. et al. (2019) The Energetics of Molecular Adaptation in Transcriptional Regulation. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20190516-074953419 Rajendran, Pradeep S. and Challis, Rosemary C. and Fowlkes, Charless C. et al. (2019) Identification of peripheral neural circuits that regulate heart rate using optogenetic and viral vector strategies. Nature Communications, 10 . Art. No. 1944. ISSN 2041-1723. PMCID PMC6486614. doi:10.1038/s41467-019-09770-1. https://resolver.caltech.edu/CaltechAUTHORS:20181107-092306925 Galstyan, Vahe and Funk, Luke and Einav, Tal et al. (2019) Combinatorial Control through Allostery. Journal of Physical Chemistry B, 123 (13). pp. 2792-2800. ISSN 1520-6106. PMCID PMC6467274. doi:10.1021/acs.jpcb.8b12517. https://resolver.caltech.edu/CaltechAUTHORS:20190102-135256302 Zhang, Xuan and Vyatskikh, Andrey and Gao, Huajian et al. (2019) Lightweight, flaw-tolerant, and ultrastrong nanoarchitected carbon. Proceedings of the National Academy of Sciences of the United States of America, 116 (14). pp. 6665-6672. ISSN 0027-8424. 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