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Number of items: 202.

2020

Vulovic, Ivan and Yao, Qing and Park, Young-Jun et al. (2020) Generation of ordered protein assemblies using rigid three-body fusion. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20200720-122329527

Chreifi, Georges and Chen, Songye and Jensen, Grant J. (2020) Rapid Tilt-Series Method for Cryo-Electron Tomography: Characterizing Stage Behavior During FISE Acquisition. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20200522-113331410

Gorasia, Dhana G. and Chreifi, Georges and Seers, Christine A. et al. (2020) In situ structure and organisation of the type IX secretion system. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20200515-143951095

Ortega, Davi R. and Yang, Wen and Subramanian, Poorna et al. (2020) Repurposing a chemosensory macromolecular machine. Nature Communications, 11 . Art. No. 2041. ISSN 2041-1723. PMCID PMC7184735. https://resolver.caltech.edu/CaltechAUTHORS:20190531-091859930

Kaplan, Mohammed and Sweredoski, Michael J. and Rodrigues, João P. G. L. M. et al. (2020) Bacterial flagellar motor PL-ring disassembly subcomplexes are widespread and ancient. Proceedings of the National Academy of Sciences of the United States of America, 117 (16). pp. 8941-8947. ISSN 0027-8424. PMCID PMC7183148. https://resolver.caltech.edu/CaltechAUTHORS:20200403-104455365

Nicolas, William J. and Ghosal, Debnath and Tocheva, Elitza I. et al. (2020) Structure of the bacterial cellulose ribbon and its assembly-guiding cytoskeleton by electron cryotomography. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20200417-145045074

Carter, Stephen D. and Hampton, Cheri M. and Langlois, Robert et al. (2020) Ribosome-associated vesicles: A dynamic subcompartment of the endoplasmic reticulum in secretory cells. Science Advances, 6 (14). Art. No. eaay9572. ISSN 2375-2548. PMCID PMC7112762. https://resolver.caltech.edu/CaltechAUTHORS:20200401-144536810

Weaver, Sara J. and Sazinsky, Matthew H. and Dalia, Triana N. et al. (2020) CryoEM structure of the Vibrio cholerae Type IV competence pilus secretin PilQ. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20200305-083306543

Weaver, Sara J. and Sazinsky, Matthew H. and Dalia, Triana N. et al. (2020) CryoEM Structure of the Vibrio cholerae Type IV Pilus Secretin PilQ. Biophysical Journal, 118 (3). 12a. ISSN 0006-3495. https://resolver.caltech.edu/CaltechAUTHORS:20200210-091000513

Metskas, Lauren Ann and Ho, Samuel and Weaver, Sara J. et al. (2020) The Effect of Cryo Temperature on Commonly used Fluorophores. Biophysical Journal, 118 (3). 150a-151a. ISSN 0006-3495. https://resolver.caltech.edu/CaltechAUTHORS:20200210-110813112

Phillips, Daniel A. and Zacharoff, Lori A. and Hampton, Cheri M. et al. (2020) A Prokaryotic Membrane Sculpting BAR Domain Protein. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20200203-093321992

2019

Mageswaran, Shrawan Kumar and Yang, Wei Y. and Chakrabarty, Yogaditya et al. (2019) Plasma membrane damage removal by F-actin-mediated shedding from repurposed filopodia. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20200102-095248499

Ghosal, Debnath and Kim, Ki Woo and Zheng, Huaixin et al. (2019) In vivo structure of the Legionella type II secretion system by electron cryotomography. Nature Microbiology, 4 (12). pp. 2101-2108. ISSN 2058-5276. PMCID PMC6879910. https://resolver.caltech.edu/CaltechAUTHORS:20190123-125316052

Carter, Stephen D. and Mamede, João I. and Hope, Thomas J. et al. (2019) Correlated cryogenic fluorescence microscopy and electron cryotomography shows that exogenous TRIM5α can form hexagonal lattices or autophagy aggregates in vivo. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20191108-075710149

Kaplan, Mohammed and Sweredoski, Michael J. and Rodrigues, João et al. (2019) Bacterial flagellar motor PL-ring disassembly sub-complexes are widespread and ancient. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20191002-094950568

Martynowycz, Michael W. and Zhao, Wei and Hattne, Johan et al. (2019) Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED. Structure, 27 (10). pp. 1594-1600. ISSN 0969-2126. PMCID PMC7145226. https://resolver.caltech.edu/CaltechAUTHORS:20190418-123951811

Anikeeva, Polina and Jensen, Grant Jay and Van Valen, David et al. (2019) Voices in methods development. Nature Methods, 16 (10). pp. 945-951. ISSN 1548-7091. PMCID PMC7075469. https://resolver.caltech.edu/CaltechAUTHORS:20191017-144439188

Auer, George K. and Oliver, Piercen M. and Rajendram, Manohary et al. (2019) Bacterial swarming reduces Proteus mirabilis and Vibrio parahaemolyticus cell stiffness and increases β-lactam susceptibility. mBio, 10 (5). Art. No. e00210-19. ISSN 2150-7511. PMCID PMC6786863. https://resolver.caltech.edu/CaltechAUTHORS:20181031-082235074

O’Neal, Lindsey and Gullett, Jessica M. and Aksenova, Anastasia et al. (2019) Distinct Chemotaxis Protein Paralogs Assemble into Chemoreceptor Signaling Arrays To Coordinate Signaling Output. mBio, 10 (5). Art. No. e01757-19. ISSN 2150-7511. PMCID PMC6759762. https://resolver.caltech.edu/CaltechAUTHORS:20190924-095952844

Nguyen, Lam T. and Oikonomou, Catherine M. and Jensen, Grant J. (2019) Simulations of proposed mechanisms of FtsZ-driven cell constriction. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20190816-081257805

Garcez, Aguinaldo S. and Kaplan, Mohammed and Nunez, Silvia C. et al. (2019) Antimicrobial effects of Photodynamic Therapy to gram negative bacteria envelope revealed by Cryo-electron tomography. In: 17th International Photodynamic Association World Congress. Proceedings of SPIE. No.11070. Society of Photo-optical Instrumentation Engineers (SPIE) , Bellingham, WA, Art. No. 110708W . ISBN 9781510628335. https://resolver.caltech.edu/CaltechAUTHORS:20190822-114532403

Yao, Qing and Weaver, Sara J. and Mock, Jee-Young et al. (2019) Fusion of DARPin to Aldolase Enables Visualization of Small Protein by Cryo-EM. Structure, 27 (7). pp. 1148-1155. ISSN 0969-2126. PMCID PMC6610650. https://resolver.caltech.edu/CaltechAUTHORS:20181107-101625710

Ghosal, Debnath and Jeong, Kwangcheol C. and Chang, Yi-Wei et al. (2019) Molecular architecture, polar targeting and biogenesis of the Legionella Dot/Icm T4SS. Nature Microbiology, 4 (7). pp. 1173-1182. ISSN 2058-5276. PMCID PMC6588468. https://resolver.caltech.edu/CaltechAUTHORS:20181030-153432354

Ortega, Davi R. and Jensen, Grant J. (2019) Regular Architecture (RegArch): A standard expression language for describing protein architectures. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20190624-114502121

Jensen, Grant and Merrikh, Houra and Monack, Denise et al. (2019) What career advice do you give your grad students or postdocs? Trends in Microbiology, 27 (6). pp. 471-472. ISSN 0966-842X. https://resolver.caltech.edu/CaltechAUTHORS:20190529-151054936

Kaplan, Mohammed and Subramanian, Poorna and Ghosal, Debnath et al. (2019) In situ imaging of the bacterial flagellar motor disassembly and assembly processes. EMBO Journal, 38 (10). Art. No. e100957. ISSN 0261-4189. PMCID PMC6627242. https://resolver.caltech.edu/CaltechAUTHORS:20190520-104026571

Ortega, Davi R. and Oikonomou, Catherine M. and Ding, H. Jane et al. (2019) ETDB-Caltech: a blockchain-based distributed public database for electron tomography. PLoS ONE, 14 (4). Art. No. e0215531. ISSN 1932-6203. PMCID PMC6464211. https://resolver.caltech.edu/CaltechAUTHORS:20181029-160304278

Xu, Min and Singla, Jitin and Tocheva, Elitza I. et al. (2019) De Novo Structural Pattern Mining in Cellular Electron Cryotomograms. Structure, 27 (4). pp. 679-691. ISSN 0969-2126. https://resolver.caltech.edu/CaltechAUTHORS:20190207-144006642

Nguyen, Lam Thanh and Oikonomou, Catherine M. and Ding, H. Jane et al. (2019) Simulations suggest a constrictive force is required for Gram-negative bacterial cell division. Nature Communications, 10 . Art. No. 1259. ISSN 2041-1723. PMCID PMC6425016. https://resolver.caltech.edu/CaltechAUTHORS:20180927-114224004

Martynowycz, Michael W. and Zhao, Wei and Hattne, Johan et al. (2019) Collection of continuous rotation MicroED Data from Ion Beam Milled Crystals of Any Size. Structure, 27 (3). pp. 545-548. ISSN 0969-2126. PMCID PMC6476546. https://resolver.caltech.edu/CaltechAUTHORS:20180927-114225333

Oikonomou, Catherine M. and Jensen, Grant J. (2019) Electron Cryotomography of Bacterial Secretion Systems. Microbiology Spectrum, 7 (2). Art. No. PSIB-0019. ISSN 2165-0497. PMCID PMC6452891. https://resolver.caltech.edu/CaltechAUTHORS:20190415-141326985

Chreifi, Georges and Chen, Songye and Metskas, Lauren Ann et al. (2019) Cryo-Electron Tomography, Faster: Development of a Fast-Incremental Tilting Scheme for Rapid Tomogram Acquisition. Biophysical Journal, 116 (3). 575a. ISSN 0006-3495. https://resolver.caltech.edu/CaltechAUTHORS:20190219-101505920

Chreifi, Georges and Chen, Songye and Metskas, Lauren Ann et al. (2019) Rapid Tilt-Series Acquisition for Electron Cryotomography. Journal of Structural Biology, 205 (2). pp. 163-169. ISSN 1047-8477. PMCID PMC6389375. https://resolver.caltech.edu/CaltechAUTHORS:20181107-100852395

Ghosal, Debnath and Kaplan, Mohammed and Chang, Yi-Wei et al. (2019) In Situ Imaging and Structure Determination of Bacterial Toxin Delivery Systems Using Electron Cryotomography. In: Legionella. Methods in Molecular Biology. No.1921. Humana Press , New York, NY, pp. 249-265. ISBN 978-1-4939-9047-4. https://resolver.caltech.edu/CaltechAUTHORS:20190211-094654581

Azubel, Maia and Carter, Stephen D. and Weiszmann, Jennifer et al. (2019) FGF21 trafficking in intact human cells revealed by cryo-electron tomography with gold nanoparticles. eLife, 8 . Art. No. e43146. ISSN 2050-084X. PMCID PMC6349402. https://resolver.caltech.edu/CaltechAUTHORS:20190207-143318376

Kaplan, Mohammed and Ghosal, Debnath and Subramanian, Poorna et al. (2019) The presence and absence of periplasmic rings in bacterial flagellar motors correlates with stator type. eLife, 8 . Art. No. e43487. ISSN 2050-084X. PMCID PMC6375700. https://resolver.caltech.edu/CaltechAUTHORS:20190122-131221284

2018

Ruhe, Zachary C. and Subramanian, Poorna and Song, Kiho et al. (2018) Programmed Secretion Arrest and Receptor-Triggered Toxin Export during Antibacterial Contact-Dependent Growth Inhibition. Cell, 175 (4). pp. 921-933. ISSN 0092-8674. PMCID PMC6333426. https://resolver.caltech.edu/CaltechAUTHORS:20181101-152903489

Mahinthichaichan, Paween and Morris, Dylan M. and Wang, Yi et al. (2018) Selective Permeability of Carboxysome Shell Pores to Anionic Molecules. Journal of Physical Chemistry B, 122 (39). pp. 9110-9118. ISSN 1520-6106. PMCID PMC6311388. https://resolver.caltech.edu/CaltechAUTHORS:20181008-085459056

Li, Po-Nan and Herrmann, Jonathan and Tolar, Bradley B. et al. (2018) Nutrient transport suggests an evolutionary basis for charged archaeal surface layer proteins. ISME Journal, 12 (10). pp. 2389-2402. ISSN 1751-7362. PMCID PMC6155111. https://resolver.caltech.edu/CaltechAUTHORS:20180618-091246320

Kaplan, Mohammed and Subramanian, Poorna and Ghosal, Debnath et al. (2018) Stable sub-complexes observed in situ suggest a modular assembly pathway of the bacterial flagellar motor. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20181008-162020064

Kaplan, Mohammed and Ghosal, Debnath and Subramanian, Poorna et al. (2018) The structural complexity of the Gammaproteobacteria flagellar motor is related to the type of its torque-generating stators. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20181008-162019924

Nguyen, Lam T. and Swulius, Matthew T. and Aich, Samya et al. (2018) Coarse-grained simulations of actomyosin rings point to a nodeless model involving both unipolar and bipolar myosins. Molecular Biology of the Cell, 29 (11). pp. 1318-1331. ISSN 1059-1524. PMCID PMC5994903. https://resolver.caltech.edu/CaltechAUTHORS:20180604-082905260

Jeong, Kwangcheol C. and Gyore, Jacob and Teng, Lin et al. (2018) Polar targeting and assembly of the Legionella Dot/Icm type IV secretion system (T4SS) by T6SS-related components. . (Unpublished) https://resolver.caltech.edu/CaltechAUTHORS:20181030-144940113

Krause, Duncan C. and Chen, Songye and Shi, Jian et al. (2018) Electron Cryotomography of Mycoplasma pneumoniae Mutants Correlates Terminal Organelle Architectural Features and Function. Molecular Microbiology, 108 (3). pp. 306-318. ISSN 0950-382X. PMCID PMC5912986. https://resolver.caltech.edu/CaltechAUTHORS:20180227-074921090

Chang, Yi-Wei and Shaffer, Carrie L. and Rettberg, Lee A. et al. (2018) In Vivo Structures of the Helicobacter pylori cag Type IV Secretion System. Cell Reports, 23 (3). pp. 673-681. ISSN 2211-1247. PMCID PMC5931392. https://resolver.caltech.edu/CaltechAUTHORS:20180417-152641769

Subramanian, Poorna and Pirbadian, Sahand and El-Naggar, Mohamed Y. et al. (2018) Ultrastructure of Shewanella oneidensis MR-1 nanowires revealed by electron cryotomography. Proceedings of the National Academy of Sciences of the United States of America, 115 (14). E3246-E3255. ISSN 0027-8424. PMCID PMC5889646. https://resolver.caltech.edu/CaltechAUTHORS:20170619-134442390

Swulius, Matthew T. and Nguyen, Lam T. and Ladinsky, Mark S. et al. (2018) Structure of the fission yeast actomyosin ring during constriction. Proceedings of the National Academy of Sciences of the United States of America, 115 (7). E1455-E1464. ISSN 0027-8424. PMCID PMC5816141. https://resolver.caltech.edu/CaltechAUTHORS:20180119-110411055

Li, Po-Nan and Herrmann, Jonathan R. and Poitevin, Frederic P. B. et al. (2018) Cryo Electron Tomography and Reaction-Diffusion Simulations Reveal a Molecular and Evolutionary Basis for Charged Archaeal Surface Layer Proteins. Biophysical Journal, 114 (3). 495a. ISSN 0006-3495. https://resolver.caltech.edu/CaltechAUTHORS:20180510-130507276

Nguyen, Lam T. and Swulius, Matthew and Jensen, Grant J. (2018) Structure and Constriction Mechanism of the Actomyosin Ring. Biophysical Journal, 114 (3). 17A. ISSN 0006-3495. https://resolver.caltech.edu/CaltechAUTHORS:20180510-091232190

Carter, Stephen D. and Mageswaran, Shrawan K. and Farino, Zachary J. et al. (2018) Distinguishing Signal From Autofluorescence In Cryogenic Correlated Light And Electron Microscopy Of Mammalian Cells. Journal of Structural Biology, 201 (1). pp. 15-25. ISSN 1047-8477. PMCID PMC5771259. https://resolver.caltech.edu/CaltechAUTHORS:20170705-091308246

2017

Nguyen, L. T. and Jensen, G. J. (2017) Structure and constriction mechanism of the actomyosin ring. Molecular Biology of the Cell, 28 (26). Art. No. M175. ISSN 1059-1524. https://resolver.caltech.edu/CaltechAUTHORS:20180321-152351149

Tran, N. T. and Carter, S. D. and Belyy, V. et al. (2017) The activated endoplasmic reticulum stress sensor IRE1 oligomerizes into filaments contained in 30 nm membrane tubes of complex topology. Molecular Biology of the Cell, 28 (26). Art. No. P2562. ISSN 1059-1524. https://resolver.caltech.edu/CaltechAUTHORS:20180321-153609538

Qin, Wei and Heal, Katherine R. and Ramdasi, Rasika et al. (2017) Nitrosopumilus maritimus gen. nov., sp. nov., Nitrosopumilus cobalaminigenes sp. nov., Nitrosopumilus oxyclinae sp. nov., and Nitrosopumilus ureiphilus sp. nov., four marine ammonia-oxidizing archaea of the phylum Thaumarchaeota. International Journal of Systematic and Evolutionary Microbiology, 67 (12). pp. 5067-5079. ISSN 1466-5026. https://resolver.caltech.edu/CaltechAUTHORS:20171023-084958349

Oikonomou, Catherine M. and Jensen, Grant J. (2017) The development of cryo-EM and how it has advanced microbiology. Nature Microbiology, 2 (12). pp. 1577-1579. ISSN 2058-5276. https://resolver.caltech.edu/CaltechAUTHORS:20171127-142132034

Ortega, Davi R. and Fleetwood, Aaron D. and Krell, Tino et al. (2017) Assigning chemoreceptors to chemosensory pathways in Pseudomonas aeruginosa. Proceedings of the National Academy of Sciences of the United States of America, 114 (48). pp. 12809-12814. ISSN 0027-8424. PMCID PMC5715753. https://resolver.caltech.edu/CaltechAUTHORS:20171114-080129120

Zielińska, Aleksandra and Billini, Maria and Möll, Andrea et al. (2017) LytM factors affect the recruitment of autolysins to the cell division site in Caulobacter crescentus. Molecular Microbiology, 106 (3). pp. 419-438. ISSN 0950-382X. https://resolver.caltech.edu/CaltechAUTHORS:20170825-154246193

Kaplan, Mohammed and Yoo, Byung-Kuk and Tang, Jau et al. (2017) Photon-induced near-field electron microscopy (PINEM) of eukaryotic cells. Angewandte Chemie International Edition, 56 (38). pp. 11498-11501. ISSN 1433-7851. https://resolver.caltech.edu/CaltechAUTHORS:20170724-124156529

Meier, Elizabeth L. and Daitch, Allison K. and Yao, Qing et al. (2017) FtsEX-mediated regulation of the final stages of cell division reveals morphogenetic plasticity in Caulobacter crescentus. PLOS Genetics, 13 (9). Art. No. e1006999. ISSN 1553-7404. PMCID PMC5607218. https://resolver.caltech.edu/CaltechAUTHORS:20170918-095203888

Briegel, Ariane and Oikonomou, Catherine M. and Chang, Yi-Wei et al. (2017) Morphology of the archaellar motor and associated cytoplasmic cone in Thermococcus kodakaraensis. EMBO Reports, 18 (9). pp. 1660-1670. ISSN 1469-221X. PMCID PMC5579351. https://resolver.caltech.edu/CaltechAUTHORS:20170619-154838039

Dobro, Megan J. and Oikonomou, Catherine M. and Piper, Aidan et al. (2017) Uncharacterized bacterial structures revealed by electron cryotomography. Journal of Bacteriology, 199 (17). Art. No. e00100-17. ISSN 0021-9193. PMCID PMC5553035. https://resolver.caltech.edu/CaltechAUTHORS:20170616-093425610

Jeong, Kwangcheol C. and Ghosal, Debnath and Chang, Yi-Wei et al. (2017) Polar delivery of Legionella type IV secretion system substrates is essential for virulence. Proceedings of the National Academy of Sciences of the United States of America, 114 (30). pp. 8077-8082. ISSN 0027-8424. PMCID PMC5544279. https://resolver.caltech.edu/CaltechAUTHORS:20170712-144409863

Chang, Yi‐Wei and Rettberg, Lee A. and Ortega, Davi R. et al. (2017) In vivo structures of an intact type VI secretion system revealed by electron cryotomography. EMBO Reports, 18 (7). pp. 1090-1099. ISSN 1469-221X. PMCID PMC5494534. https://resolver.caltech.edu/CaltechAUTHORS:20170515-095516428

Yao, Qing and Jewett, Andrew I. and Chang, Yi‐Wei et al. (2017) Short FtsZ filaments can drive asymmetric cell envelope constriction at the onset of bacterial cytokinesis. EMBO Journal, 36 (11). pp. 1577-1589. ISSN 1460-2075. PMCID PMC5452018. https://resolver.caltech.edu/CaltechAUTHORS:20170504-103226288

Oikonomou, Catherine M. and Jensen, Grant J. (2017) Cellular Electron Cryotomography: Toward Structural Biology In Situ. Annual Review of Biochemistry, 86 . pp. 873-896. ISSN 0066-4154. https://resolver.caltech.edu/CaltechAUTHORS:20170421-082204689

Distelhorst, Steven L. and Jurkovic, Dominika A. and Shi, Jian et al. (2017) The variable internal structure of the Mycoplasma penetrans attachment organelle revealed by biochemical and microscopic analyses: implications for attachment organelle mechanism and evolution. Journal of Bacteriology, 199 (12). Art. No. e00069-17. ISSN 0021-9193. PMCID PMC5446615. https://resolver.caltech.edu/CaltechAUTHORS:20170410-125440557

Samson, Rachel Y. and Dobro, Megan J. and Jensen, Grant J. et al. (2017) The Structure, Function and Roles of the Archaeal ESCRT Apparatus. In: Prokaryotic Cytoskeletons. Subcellular Biochemistry. No.84. Springer , Cham, pp. 357-377. ISBN 978-3-319-53045-1. https://resolver.caltech.edu/CaltechAUTHORS:20170522-084200520

Ghosal, Debnath and Chang, Yi-Wei and Jeong, Kwangcheol C. et al. (2017) In situ structure of the Legionella Dot/Icm type IV secretion system by electron cryotomography. EMBO Reports, 18 (5). pp. 726-732. ISSN 1469-221X. PMCID PMC5412798. https://resolver.caltech.edu/CaltechAUTHORS:20170313-131852950

Briegel, Ariane and Jensen, Grant (2017) Progress and Potential of Electron Cryotomography as Illustrated by Its Application to Bacterial Chemoreceptor Arrays. Annual Review of Biophysics, 46 . pp. 1-21. ISSN 1936-122X. https://resolver.caltech.edu/CaltechAUTHORS:20170317-103256482

Schulz, Frederik and Yutin, Natalya and Ivanova, Natalia N. et al. (2017) Giant viruses with an expanded complement of translation system components. Science, 356 (6333). pp. 82-85. ISSN 0036-8075. https://resolver.caltech.edu/CaltechAUTHORS:20170410-065731786

Racki, Lisa R. and Tocheva, Elitza I. and Dieterle, Michael G. et al. (2017) Polyphosphate granule biogenesis is temporally and functionally tied to cell cycle exit during starvation in Pseudomonas aeruginosa. Proceedings of the National Academy of Sciences of the United States of America, 114 (12). E2440-E2449. ISSN 0027-8424. PMCID PMC5373386. https://resolver.caltech.edu/CaltechAUTHORS:20170306-140446676

Cserti, Emöke and Rosskopf, Sabine and Chang, Yi-Wei et al. (2017) Dynamics of the peptidoglycan biosynthetic machinery in the stalked budding bacterium Hyphomonas neptunium. Molecular Microbiology, 103 (5). pp. 875-895. ISSN 0950-382X. https://resolver.caltech.edu/CaltechAUTHORS:20170104-102831596

Chang, Yi-Wei and Kjær, Andreas and Ortega, Davi R. et al. (2017) Architecture of the Vibrio cholerae toxin-coregulated pilus machine revealed by electron cryotomography. Nature Microbiology, 2 . Art. No. 16269 . ISSN 2058-5276. PMCID PMC5302817. https://resolver.caltech.edu/CaltechAUTHORS:20161206-161836906

Mahinthichaichan, Paween and Morris, Dylan and Wang, Yi et al. (2017) Bacterial Carboxysome Shell Proteins are Selectively Permeable to Carbon Fixation Substrates. Biophysical Journal, 112 (3). 239a. ISSN 0006-3495. https://resolver.caltech.edu/CaltechAUTHORS:20170629-135634085

Tavormina, Patricia L. and Kellermann, Matthias Y. and Antony, Chakkiath Paul et al. (2017) Starvation and recovery in the deep-sea methanotroph Methyloprofundus sedimenti. Molecular Microbiology, 103 (2). pp. 242-252. ISSN 0950-382X. https://resolver.caltech.edu/CaltechAUTHORS:20161017-155437081

2016

Nguyen, L. T. and Swulius, M. T. and Mishra, M. et al. (2016) Constriction mechanism of the actomyosin ring. Molecular Biology of the Cell, 27 . Art. No. P1851. ISSN 1059-1524. https://resolver.caltech.edu/CaltechAUTHORS:20170331-135448715

Carter, S. D. and Mageswaran, S. K. and Farino, Z. J. et al. (2016) Development of cryogenic correlated light electron microscopy methods to study mechanisms of intracellular trafficking and their relationships to the secretory pathway. Molecular Biology of the Cell, 27 . Art. No. P30. ISSN 1059-1524. https://resolver.caltech.edu/CaltechAUTHORS:20170331-131655781

Wang, Haoqing and Cohen, Alexander A. and Galimidi, Rachel P. et al. (2016) Cryo-EM structure of a CD4-bound open HIV-1 envelope trimer reveals structural rearrangements of the gp120 V1V2 loop. Proceedings of the National Academy of Sciences of the United States of America, 113 (46). E7151-E7158. ISSN 0027-8424. PMCID PMC5135367. https://resolver.caltech.edu/CaltechAUTHORS:20161101-072102928

Skennerton, Connor T. and Haroon, Mohamed F. and Briegel, Ariane et al. (2016) Phylogenomic analysis of Candidatus ‘Izimaplasma’ species: free-living representatives from a Tenericutes clade found in methane seeps. ISME Journal, 10 (11). pp. 2679-2692. ISSN 1751-7362. PMCID PMC5113845. https://resolver.caltech.edu/CaltechAUTHORS:20160418-080655842

Briegel, Ariane and Ortega, Davi R. and Mann, Petra et al. (2016) Chemotaxis cluster 1 proteins form cytoplasmic arrays in Vibrio cholera and are stabilized by a double signaling domain receptor DosM. Proceedings of the National Academy of Sciences of the United States of America, 113 (37). pp. 10412-10417. ISSN 0027-8424. PMCID PMC5027440. https://resolver.caltech.edu/CaltechAUTHORS:20160831-084712382

Tocheva, Elitza I. and Ortega, Davi R. and Jensen, Grant J. (2016) Author's reply. Nature Reviews Microbiology, 14 (9). p. 600. ISSN 1740-1526. https://resolver.caltech.edu/CaltechAUTHORS:20160801-081533020

Tocheva, Elitza I. and Ortega, Davi R. and Jensen, Grant J. (2016) Sporulation, bacterial cell envelopes, and the origin of life. Nature Reviews Microbiology, 14 (8). pp. 535-542. ISSN 1740-1526. PMCID PMC5327842. https://resolver.caltech.edu/CaltechAUTHORS:20160516-095404921

Nguyen, Lam T. and Gumbart, James C. and Jensen, Grant J. (2016) Coarse-Grained Molecular Dynamics Simulations of the Bacterial Cell Wall. In: Bacterial Cell Wall Homeostasis. Methods in Molecular Biology. No.1440. Springer , New York, NY, pp. 247-270. ISBN 978-1-4939-3674-8. https://resolver.caltech.edu/CaltechAUTHORS:20160620-095100499

Li, Yen-Li and Chandrasekaran, Viswanathan and Carter, Stephen D. et al. (2016) Primate TRIM5 proteins form hexagonal nets on HIV-1 capsids. eLife, 5 . Art. No. 16269. ISSN 2050-084X. PMCID PMC4936896. https://resolver.caltech.edu/CaltechAUTHORS:20160613-141038489

Grime, John M. A. and Dama, James F. and Ganser-Pornillos, Barbie K. et al. (2016) Coarse-grained simulation reveals key features of HIV-1 capsid self-assembly. Nature Communications, 7 . Art. No. 11568. ISSN 2041-1723. PMCID PMC4869257. https://resolver.caltech.edu/CaltechAUTHORS:20160516-083514191

Oikonomou, Catherine M. and Jensen, Grant J. (2016) A new view into prokaryotic cell biology from electron cryotomography. Nature Reviews Microbiology, 14 (4). pp. 205-220. ISSN 1740-1526. PMCID PMC5551487. https://resolver.caltech.edu/CaltechAUTHORS:20160307-090319472

Beeby, Morgan and Ribardo, Deborah A. and Brennan, Caitlin A. et al. (2016) Diverse high-torque bacterial flagellar motors assemble wider stator rings using a conserved protein scaffold. Proceedings of the National Academy of Sciences of the United States of America, 113 (13). E1917-E1926. ISSN 0027-8424. PMCID PMC4822576. https://resolver.caltech.edu/CaltechAUTHORS:20160315-073414510

Chang, Yi-Wei and Rettberg, Lee A. and Treuner-Lange, Anke et al. (2016) Architecture of the type IVa pilus machine. Science, 351 (6278). aad2001. ISSN 0036-8075. PMCID PMC5929464. https://resolver.caltech.edu/CaltechAUTHORS:20160315-090327567

Chang, Yi-Wei and Rettberg, Lee and Treuner-Lange, Anke et al. (2016) Architecture of the Type IVA Pilus Machine. Biophysical Journal, 110 (3). 468A-469A. ISSN 0006-3495. https://resolver.caltech.edu/CaltechAUTHORS:20160606-134354848

Nguyen, Lam T. and Swulius, Matthew and Gumbart, James C. et al. (2016) Coarse-Grained Simulations Reveal Mechanisms of Bacterial Morphogenesis. Biophysical Journal, 110 (3). 468A. ISSN 0006-3495. https://resolver.caltech.edu/CaltechAUTHORS:20160606-134032836

Cornejo, Elias and Subramanian, Poorna and Li, Zhuo et al. (2016) Dynamic Remodeling of the Magnetosome Membrane Is Triggered by the Initiation of Biomineralization. mBio, 7 (1). e01898-15. ISSN 2150-7511. PMCID PMC4791847. https://resolver.caltech.edu/CaltechAUTHORS:20160222-140321490

Subramanian, Poorna and Pirbadian, Sahand and El-Naggar, Mohamed Y. et al. (2016) Electron Cryo-Tomography of Nanowires in Shewanella Oneidensis MR-1. Biophysical Journal, 110 (3). 23A. ISSN 0006-3495. https://resolver.caltech.edu/CaltechAUTHORS:20160603-154022255

Pirbadian, Sahand and Barchinger, Sarah E. and Subramanian, Poorna et al. (2016) Multiheme Cytochromes and the Bacterial Nanowires of Shewanella oneidensis MR-1: Regulation, Structure, and Extracellular Electron Transport Mechanisms. Biophysical Journal, 110 (3). 314A. ISSN 0006-3495. https://resolver.caltech.edu/CaltechAUTHORS:20160606-082437422

Swulius, Matthew T. and Nguyen, Lam T. and Ladinsky, Mark et al. (2016) Using Electron Cryotomography and Coarse-Grained Molecular Dynamics to Study Contractile Mechanisms of Eukaryotic Cell Division Machinery. Biophysical Journal, 110 (3). 156A. ISSN 0006-3495. https://resolver.caltech.edu/CaltechAUTHORS:20160606-075844512

Oikonomou, C. M. and Swulius, M. T. and Briegel, A. et al. (2016) Electron cryotomography. In: Imaging Bacterial Molecules, Structures and Cells. Methods in Microbiology. No.43. Elsevier , Amsterdam, pp. 115-139. ISBN 9780128093924. https://resolver.caltech.edu/CaltechAUTHORS:20170825-145104411

Harwood, Colin and Jensen, G. J. (2016) Imaging Bacterial Molecules, Structures and Cells - Preface. In: Imaging Bacterial Molecules, Structures and Cells. Methods in Microbiology. No.43. Elsevier , Amsterdam, xi. ISBN 9780128093924. https://resolver.caltech.edu/CaltechAUTHORS:20170825-151058871

2015

Ding, H. Jane and Oikonomou, Catherine M. and Jensen, Grant J. (2015) The Caltech Tomography Database and Automatic Processing Pipeline. Journal of Structural Biology, 192 (2). pp. 279-286. ISSN 1047-8477. PMCID PMC4633326. https://resolver.caltech.edu/CaltechAUTHORS:20150622-113741961

Woodward, Cora L. and Mendonça, Luiza M. and Jensen, Grant J. (2015) Direct visualization of vaults within intact cells by electron cryo-tomography. Cellular and Molecular Life Sciences, 72 (17). pp. 3401-3409. ISSN 1420-682X. PMCID PMC4898762. https://resolver.caltech.edu/CaltechAUTHORS:20150908-140337636

Nguyen, Lam T. and Gumbart, James C. and Beeby, Morgan et al. (2015) Coarse-grained simulations of bacterial cell wall growth reveal that local coordination alone can be sufficient to maintain rod shape. Proceedings of the National Academy of Sciences of the United States of America, 112 (28). E3689-E3698. ISSN 0027-8424. PMCID PMC4507204. https://resolver.caltech.edu/CaltechAUTHORS:20150702-111849094

Briegel, Ariane and Ortega, Davi R. and Huang, Audrey N. et al. (2015) Structural conservation of chemotaxis machinery across Archaea and Bacteria. Environmental Microbiology Reports, 7 (3). pp. 414-419. ISSN 1758-2229. PMCID PMC4782749. https://resolver.caltech.edu/CaltechAUTHORS:20150121-081216205

Jani, Charul and Tocheva, Elitza I. and McAuley, Scott et al. (2015) Streptomyces: A Screening Tool for Bacterial Cell Division Inhibitors. Journal of Biomolecular Screening, 20 (2). pp. 275-284. ISSN 1087-0571. PMCID PMC4888893. https://resolver.caltech.edu/CaltechAUTHORS:20141007-152805174

Nguyen, Lam T. and Swulius, Matthew T. and Mishra, Mithilesh et al. (2015) Coarse-Grained Simulations Reveal Mechanisms of Fission Yeast Cytokinesis. Biophysical Journal, 108 (2). 298A. ISSN 0006-3495. https://resolver.caltech.edu/CaltechAUTHORS:20151106-080648954

Woodward, Cora L. and Cheng, Sarah N. and Jensen, Grant J. (2015) Electron cryo-tomography studies of maturing HIV-1 particles reveal the assembly pathway of the viral core. Journal of Virology, 89 (2). pp. 1267-1277. ISSN 0022-538X. PMCID PMC4300640. https://resolver.caltech.edu/CaltechAUTHORS:20141117-100140935

2014

Müller, Axel and Beeby, Morgan and McDowall, Alasdair W. et al. (2014) Ultrastructure and complex polar architecture of the human pathogen Campylobacter jejuni. MicrobiologyOpen, 3 (5). pp. 702-710. ISSN 2045-8827. PMCID PMC4234261. https://resolver.caltech.edu/CaltechAUTHORS:20140804-114209444

Chang, Yi-Wei and Chen, Songye and Tocheva, Elitza I. et al. (2014) Correlated cryogenic photoactivated localization microscopy and cryo-electron tomography. Nature Methods, 11 (7). pp. 737-739. ISSN 1548-7091. PMCID PMC4081473. https://resolver.caltech.edu/CaltechAUTHORS:20140402-152401360

Tocheva, Elitza I. and Matson, Eric G. and Cheng, Sarah N. et al. (2014) Structure and Expression of Propanediol Utilization Microcompartments in Acetonema longum. Journal of Bacteriology, 196 (9). pp. 1651-1658. ISSN 0021-9193. PMCID PMC3993321. https://resolver.caltech.edu/CaltechAUTHORS:20140516-082115686

Briegel, Ariane and Ladinsky, Mark S. and Oikonomou, Catherine M. et al. (2014) Structure of bacterial cytoplasmic chemoreceptor arrays and implications for chemotactic signaling. eLife, 3 . Art. No. e02151. ISSN 2050-084X. PMCID PMC3964821. https://resolver.caltech.edu/CaltechAUTHORS:20140502-092924910

Briegel, Ariane and Wong, Margaret L. and Hodges, Heather L. et al. (2014) New Insights into Bacterial Chemoreceptor Array Structure and Assembly from Electron Cryotomography. Biochemistry, 53 (10). pp. 1575-1585. ISSN 0006-2960. PMCID PMC3985956; PMC4204879. https://resolver.caltech.edu/CaltechAUTHORS:20140310-115046309

Pilhofer, Martin and Aistleitner, Karin and Ladinsky, Mark S. et al. (2014) Architecture and host interface of environmental chlamydiae revealed by electron cryotomography. Environmental Microbiology, 16 (2). pp. 417-429. ISSN 1462-2912. PMCID PMC4949044. https://resolver.caltech.edu/CaltechAUTHORS:20140318-101020463

Gumbart, James C. and Beeby, Morgan and Jensen, Grant J. et al. (2014) Escherichia coli Peptidoglycan Structure and Mechanics as Predicted by Atomic-Scale Simulations. PLOS Computational Biology, 10 (2). Art. No. e10034. ISSN 1553-7358. PMCID PMC3930494. https://resolver.caltech.edu/CaltechAUTHORS:20140604-091447469

Shikuma, Nicholas J. and Pilhofer, Martin and Weiss, Gregor L. et al. (2014) Marine Tubeworm Metamorphosis Induced by Arrays of Bacterial Phage Tail–Like Structures. Science, 343 (6170). pp. 529-533. ISSN 0036-8075. PMCID PMC4949041. https://resolver.caltech.edu/CaltechAUTHORS:20140113-134430398

2013

Pilhofer, Martin and Aistleitner, Karin and Biboy, Jacob et al. (2013) Discovery of chlamydial peptidoglycan reveals bacteria with murein sacculi but without FtsZ. Nature Communications, 4 (12). Art. No. 2856. ISSN 2041-1723. PMCID PMC3847603. https://resolver.caltech.edu/CaltechAUTHORS:20140204-110344222

Gan, Lu and Ladinsky, Mark S. and Jensen, Grant J. (2013) Chromatin in a marine picoeukaryote is a disordered assemblage of nucleosomes. Chromosoma, 122 (5). pp. 377-386. ISSN 0009-5915. PMCID PMC3777167. https://resolver.caltech.edu/CaltechAUTHORS:20131018-100119675

Tocheva, Elitza I. and Dekas, Anne E. and McGlynn, Shawn E. et al. (2013) Polyphosphate Storage during Sporulation in the Gram-Negative Bacterium Acetonema longum. Journal of Bacteriology, 195 (17). pp. 3940-3946. ISSN 0021-9193. PMCID PMC3754598. https://resolver.caltech.edu/CaltechAUTHORS:20130909-141442695

Briegel, Ariane and Ames, Peter and Gumbart, James C. et al. (2013) The mobility of two kinase domains in the Escherichia coli chemoreceptor array varies with signalling state. Molecular Microbiology, 89 (5). pp. 831-841. ISSN 0950-382X. PMCID PMC3763515. https://resolver.caltech.edu/CaltechAUTHORS:20130920-104107822

Dobro, Megan J. and Samson, Rachel Y. and Yu, Zhiheng et al. (2013) Electron cryotomography of ESCRT assemblies and dividing Sulfolobus cells suggests that spiraling filaments are involved in membrane scission. Molecular Biology of the Cell, 24 (15). pp. 2319-2327. ISSN 1059-1524. PMCID PMC3727925. https://resolver.caltech.edu/CaltechAUTHORS:20130917-104519857

Briegel, Ariane and Pilhofer, Martin and Mastronarde, David N. et al. (2013) The challenge of determining handedness in electron tomography and the use of DNA origami gold nanoparticle helices as molecular standards. Journal of Structural Biology, 183 (1). pp. 95-98. ISSN 1047-8477. PMCID PMC3765063. https://resolver.caltech.edu/CaltechAUTHORS:20130822-102116618

Beeby, Morgan and Gumbart, James C. and Roux, Benoît et al. (2013) Architecture and assembly of the Gram-positive cell wall. Molecular Microbiology, 88 (4). pp. 664-672. ISSN 0950-382X. PMCID PMC3663049. https://resolver.caltech.edu/CaltechAUTHORS:20130624-103414394

Tocheva, Elitza I. and López-Garrido, Javier and Hughes, H. Velocity et al. (2013) Peptidoglycan transformations during Bacillus subtilis sporulation. Molecular Microbiology, 88 (4). pp. 673-686. ISSN 0950-382X. PMCID PMC3893088. https://resolver.caltech.edu/CaltechAUTHORS:20130624-140301008

Jensen, Grant J. and Briegel, Ariane and Beeby, Morgan (2013) Visualizing large macromolecular assemblies in vivo with electron cryotomography. In: 245th ACS National Meeting & Exposition, Abstracts of Papers, April 7-11, 2013, New Orleans, LA. https://resolver.caltech.edu/CaltechAUTHORS:20130410-150257170

Pilhofer, Martin and Jensen, Grant J. (2013) The bacterial cytoskeleton: more than twisted filaments. Current Opinion in Cell Biology, 25 (1). pp. 125-133. ISSN 0955-0674. PMCID PMC3597445. https://resolver.caltech.edu/CaltechAUTHORS:20130401-091857529

Gumbart, James C. and Beeby, Morgan and Jensen, Grant J. et al. (2013) Assembly and Architecture of Gram-Positive and -Negative Cell Walls. Biophysical Journal, 104 (2). 642A. ISSN 0006-3495. https://resolver.caltech.edu/CaltechAUTHORS:20130425-135202813

Jensen, Grant J. (2013) Two Case Studies where Electron Cryotomography has Revealed Mechanism: ESCRT and the Type VI Secretion System. Biophysical Journal, 104 (2). 206A-206A. ISSN 0006-3495. https://resolver.caltech.edu/CaltechAUTHORS:20130426-093928748

Yu, Zhiheng and Dobro, Megan J. and Woodward, Cora L. et al. (2013) Unclosed HIV-1 Capsids Suggest a Curled Sheet Model of Assembly. Journal of Molecular Biology, 425 (1). pp. 112-123. ISSN 0022-2836. PMCID PMC3597093. https://resolver.caltech.edu/CaltechAUTHORS:20130327-152515876

Abrusci, Patrizia and Vergara-Irigaray, Marta and Johnson, Steven et al. (2013) Architecture of the major component of the type III secretion system export apparatus. Nature Structural & Molecular Biology, 20 (1). pp. 99-104. ISSN 1545-9985. PMCID PMC3537844. https://resolver.caltech.edu/CaltechAUTHORS:20130131-161741196

2012

Schlimpert, Susan and Klein, Eric A. and Briegel, Ariane et al. (2012) General Protein Diffusion Barriers Create Compartments within Bacterial Cells. Cell, 151 (6). pp. 1270-1282. ISSN 0092-8674. PMCID PMC3542395. https://resolver.caltech.edu/CaltechAUTHORS:20130104-105656715

Patwardhan, Ardan and Carazo, José-Maria and Carragher, Bridget et al. (2012) Data management challenges in three-dimensional EM. Nature Structural & Molecular Biology, 19 (12). pp. 1203-1207. ISSN 1545-9985. PMCID PMC4048199. https://resolver.caltech.edu/CaltechAUTHORS:20130114-141533149

Swulius, Matthew T. and Jensen, Grant J. (2012) The Helical MreB Cytoskeleton in Escherichia coli MC1000/pLE7 Is an Artifact of the N-Terminal Yellow Fluorescent Protein Tag. Journal of Bacteriology, 194 (23). pp. 6382-6386. ISSN 0021-9193. PMCID PMC3497537. https://resolver.caltech.edu/CaltechAUTHORS:20121219-145126195

Yamaichi, Yoshiharu and Bruckner, Raphael and Ringgaard, Simon et al. (2012) A multidomain hub anchors the chromosome segregation and chemotactic machinery to the bacterial pole. Genes and Development, 26 (20). pp. 2348-2360. ISSN 0890-9369. PMCID PMC3475806. https://resolver.caltech.edu/CaltechAUTHORS:20121127-091703726

Basler, M. and Pilhofer, M. and Henderson, G. P. et al. (2012) Type VI secretion requires a dynamic contractile phage tail-like structure. Nature, 483 (7388). pp. 182-187. ISSN 0028-0836. https://resolver.caltech.edu/CaltechAUTHORS:20120326-070420034

Basler, M. and Pilhofer, M. and Henderson, G. P. et al. (2012) Type VI secretion requires a dynamic contractile phage tail-like structure. Nature, 483 (7388). pp. 182-186. ISSN 0028-0836. PMCID PMC3527127. https://resolver.caltech.edu/CaltechAUTHORS:20200417-142717709

Briegel, Ariane and Li, Xiaoxiao and Bilwes, Alexandrine M. et al. (2012) Bacterial chemoreceptor arrays are hexagonally packed trimers of receptor dimers networked by rings of kinase and coupling proteins. Proceedings of the National Academy of Sciences of the United States of America, 109 (10). pp. 3766-3771. ISSN 0027-8424. PMCID PMC3309718. https://resolver.caltech.edu/CaltechAUTHORS:20120326-100949924

Beeby, Morgan and Cho, Mimi and Stubbe, JoAnne et al. (2012) Growth and Localization of Polyhydroxybutyrate Granules in Ralstonia eutropha. Journal of Bacteriology, 194 (5). pp. 1092-1099. ISSN 0021-9193. PMCID PMC3294789. https://resolver.caltech.edu/CaltechAUTHORS:20120316-151333425

Gan, Lu and Jensen, Grant J. (2012) Electron tomography of cells. Quarterly Reviews of Biophysics, 45 (1). pp. 27-56. ISSN 0033-5835. https://resolver.caltech.edu/CaltechAUTHORS:20120327-091111234

2011

Pilhofer, Martin and Ladinsky, Mark S. and McDowall, Alasdair W. et al. (2011) Microtubules in Bacteria: Ancient Tubulins Build a Five-Protofilament Homolog of the Eukaryotic Cytoskeleton. PLoS Biology, 9 (12). Art. No. e1001213. ISSN 1544-9173. PMCID PMC3232192. https://resolver.caltech.edu/CaltechAUTHORS:20120203-085706225

Briegel, Ariane and Beeby, Morgan and Thanbichler, Martin et al. (2011) Activated chemoreceptor arrays remain intact and hexagonally packed. Molecular Microbiology, 82 (3). pp. 748-757. ISSN 0950-382X. PMCID PMC3641884. https://resolver.caltech.edu/CaltechAUTHORS:20111219-115630715

Draper, Olga and Byrne, Meghan E. and Li, Zhuo et al. (2011) MamK, a bacterial actin, forms dynamic filaments in vivo that are regulated by the acidic proteins MamJ and LimJ. Molecular Microbiology, 82 (2). pp. 342-354. ISSN 0950-382X. https://resolver.caltech.edu/CaltechAUTHORS:20111213-110839663

Gan, Lu and Ladinsky, Mark S. and Jensen, Grant J. (2011) Organization of the Smallest Eukaryotic Spindle. Current Biology, 21 (18). pp. 1578-1583. ISSN 0960-9822. PMCID PMC3234289. https://resolver.caltech.edu/CaltechAUTHORS:20111021-085847452

Tocheva, Elitza I. and Matson, Eric G. and Morris, Dylan M. et al. (2011) Peptidoglycan Remodeling and Conversion of an Inner Membrane into an Outer Membrane during Sporulation. Cell, 146 (5). pp. 799-812. ISSN 0092-8674. PMCID PMC3176627. https://resolver.caltech.edu/CaltechAUTHORS:20110928-072623751

Chen, Songye and Beeby, Morgan and Murphy, Gavin E. et al. (2011) Structural diversity of bacterial flagellar motors. EMBO Journal, 30 (14). pp. 2972-2981. ISSN 0261-4189. PMCID PMC3641884. https://resolver.caltech.edu/CaltechAUTHORS:20110908-081125458

Guerrero-Ferreira, Ricardo C. and Viollier, Patrick H. and Ely, Bert et al. (2011) Alternative mechanism for bacteriophage adsorption to the motile bacterium Caulobacter crescentus. Proceedings of the National Academy of Sciences of the United States of America, 108 (24). pp. 9963-9968. ISSN 0027-8424. PMCID PMC3116389. https://resolver.caltech.edu/CaltechAUTHORS:20110624-134716883

Shetty, Ameesha and Chen, Shicheng and Tocheva, Elitza I. et al. (2011) Nanopods: A New Bacterial Structure and Mechanism for Deployment of Outer Membrane Vesicles. PLoS ONE, 6 (6). Art. No. e20725. ISSN 1932-6203. PMCID PMC3110197. https://resolver.caltech.edu/CaltechAUTHORS:20110624-091620627

Swulius, Matthew T. and Chen, Songye and Ding, H. Jane et al. (2011) Long helical filaments are not seen encircling cells in electron cryotomograms of rod-shaped bacteria. Biochemical and Biophysical Research Communications, 407 (4). pp. 650-655. ISSN 0006-291X. PMCID PMC3093302. https://resolver.caltech.edu/CaltechAUTHORS:20110524-100904457

2010

Fu, Chi-yu and Wang, Kang and Gan, Lu et al. (2010) In Vivo Assembly of an Archaeal Virus Studied with Whole-Cell Electron Cryotomography. Structure, 18 (12). pp. 1579-1586. ISSN 0969-2126. PMCID PMC3042139. https://resolver.caltech.edu/CaltechAUTHORS:20110113-115948690

Jensen, Grant J. (2010) Preface. In: Cryo-EM, Part B: 3-D Reconstruction. Methods in Enzymology. No.482. Academic Press , San Diego, CA, xv-xvi. ISBN 9780123849915. https://resolver.caltech.edu/CaltechAUTHORS:20200423-121036526

Jensen, Grant J. (2010) Preface. In: Cryo-EM, Part C: Analyses, Interpretation, and Case studies. Methods in Enzymology. No.483. Academic Press , Amsterdam, xv-xvi. ISBN 978-0-12-384993-9. https://resolver.caltech.edu/CaltechAUTHORS:20200507-132959366

Ingerson-Mahar, Michael and Briegel, Ariane and Werner, John N. et al. (2010) The metabolic enzyme CTP synthase forms cytoskeletal filaments. Nature Cell Biology, 12 (8). pp. 739-746. ISSN 1465-7392. PMCID PMC3210567. https://resolver.caltech.edu/CaltechAUTHORS:20100830-105222501

Möll, Andrea and Schlimpert, Susan and Briegel, Ariane et al. (2010) DipM, a new factor required for peptidoglycan remodelling during cell division in Caulobacter crescentus. Molecular Microbiology, 77 (1). pp. 90-107. ISSN 0950-382X. PMCID PMC3057925. https://resolver.caltech.edu/CaltechAUTHORS:20100713-091755026

Cabeen, Matthew T. and Murolo, Michelle A. and Briegel, Ariane et al. (2010) Mutations in the Lipopolysaccharide Biosynthesis Pathway Interfere with Crescentin-Mediated Cell Curvature in Caulobacter crescentus. Journal of Bacteriology, 192 (13). pp. 3368-3378. ISSN 0021-9193. PMCID PMC2897673. https://resolver.caltech.edu/CaltechAUTHORS:20110804-135325381

Tocheva, Elitza I. and Li, Zhuo and Jensen, Grant J. (2010) Electron Cryotomography. Cold Spring Harbor Perspectives in Biology, 2 (6). Art. No. a003442 . ISSN 1943-0264. PMCID PMC2869529. https://resolver.caltech.edu/CaltechAUTHORS:20100805-110641753

Chen, Songye and McDowall, Alasdair and Dobro, Megan J. et al. (2010) Electron Cryotomography of Bacterial Cells. Journal of Visualized Experiments (39). Art. No. 1943. ISSN 1940-087X. PMCID PMC3149996. https://resolver.caltech.edu/CaltechAUTHORS:20110804-140527126

Iancu, Cristina V. and Morris, Dylan M. and Dou, Zhicheng et al. (2010) Organization, Structure, and Assembly of α-Carboxysomes Determined by Electron Cryotomography of Intact Cells. Journal of Molecular Biology, 396 (1). pp. 105-117. ISSN 0022-2836. PMCID PMC2853366. https://resolver.caltech.edu/CaltechAUTHORS:20100308-111110207

Kühn, Juliane and Briegel, Ariane and Mörschel, Erhard et al. (2010) Bactofilins, a ubiquitous class of cytoskeletal proteins mediating polar localization of a cell wall synthase in Caulobacter crescentus. EMBO Journal, 29 (2). pp. 327-339. ISSN 0261-4189. PMCID PMC2824468. https://resolver.caltech.edu/CaltechAUTHORS:20100218-083022805

Pilhofer, Martin and Ladinsky, Mark S. and McDowall, Alasdair W. et al. (2010) Bacterial TEM: New Insights from Cryo-Microscopy. In: Electron Microscopy of Model Systems. Methods in Cell Biology . No.96. Elsevier , pp. 21-45. ISBN 978-0-12-381007-6. https://resolver.caltech.edu/CaltechAUTHORS:20101012-135545845

Leong, Peter A. and Yu, Xuekui and Zhou, Z. Hong et al. (2010) Correcting for the Ewald Sphere in High-Resolution Single-Particle Reconstructions. In: Cryo-EM, Part B: 3-D Reconstruction. Methods in Enzymology. No.482. Academic Press , Amsterdam, pp. 369-380. ISBN 9780123849915. PMCID PMC3716286. https://resolver.caltech.edu/CaltechAUTHORS:20110301-084428242

Briegel, Ariane and Chen, Songye and Koster, Abraham J. et al. (2010) Correlated Light and Electron Cryo-Microscopy. In: Cryo-EM, Part A: Sample Preparation and Data Collection. Methods in Enzymology. No.481. Academic Press , Amsterdam, pp. 317-341. ISBN 9780123749062. https://resolver.caltech.edu/CaltechAUTHORS:20110228-111002641

Ladinsky, Mark S. (2010) Micromanipulator-Assisted Vitreous Cryosectioning and Sample Preparation by High-Pressure Freezing. In: Cryo-EM, Part A: Sample Preparation and Data Collection. Methods in Enzymology. No.481. Academic Press , Amsterdam, pp. 165-194. ISBN 9780123749062. https://resolver.caltech.edu/CaltechAUTHORS:20110301-083332110

Dobro, Megan J. and Melanson, Linda A. and Jensen, Grant J. et al. (2010) Plunge Freezing for Electron Cryomicroscopy. In: Cryo-EM, Part A: Sample Preparation and Data Collection. Methods in Enzymology . No.481. Academic Press , Amsterdam, pp. 63-82. ISBN 9780123749062. https://resolver.caltech.edu/CaltechAUTHORS:20110228-143852960

2009

Briegel, Ariane and Ortega, Davi R. and Tocheva, Elitza I. et al. (2009) Universal architecture of bacterial chemoreceptor arrays. Proceedings of the National Academy of Sciences of the United States of America, 106 (40). pp. 17181-17186. ISSN 0027-8424. PMCID PMC2761316. https://resolver.caltech.edu/CaltechAUTHORS:20091019-151620276

Suloway, Christian and Shi, Jian and Cheng, Anchi et al. (2009) Fully automated, sequential tilt-series acquisition with Leginon. Journal of Structural Biology, 167 (1). pp. 11-18. ISSN 1047-8477. PMCID PMC2724967. https://resolver.caltech.edu/CaltechAUTHORS:20101209-110311836

Li, Zhuo and Jensen, Grant J. (2009) Electron cryotomography: a new view into microbial ultrastructure. Current Opinion in Microbiology, 12 (3). pp. 333-340. ISSN 1369-5274. PMCID PMC2747746. https://resolver.caltech.edu/CaltechAUTHORS:20090904-112844480

He, Yongning and Jensen, Grant J. and Bjorkman, Pamela J. (2009) Nanogold as a specific marker for electron cryotomography. Microscopy and Microanalysis, 15 (3). pp. 183-188. ISSN 1431-9276. PMCID PMC2785728. https://resolver.caltech.edu/CaltechAUTHORS:20090813-075852803

Garin, Jérôme and Jensen, Grant J. (2009) Techniques. Current Opinion in Microbiology, 12 (3). pp. 282-284. ISSN 1369-5274. https://resolver.caltech.edu/CaltechAUTHORS:20110317-143734935

Garin, Jérôme and Jensen, Grant J. (2009) Which, when, where, and how? Current Opinion in Microbiology, 12 (3). pp. 282-284. ISSN 1369-5274. https://resolver.caltech.edu/CaltechAUTHORS:20090824-144411956

He, Yongning and Jensen, Grant J. and Bjorkman, Pamela J. (2009) Cryo-electron tomography of homophilic adhesion mediated by the neural cell adhesion molecule L1. Structure, 17 (3). pp. 460-471. ISSN 0969-2126. PMCID PMC2744468. https://resolver.caltech.edu/CaltechAUTHORS:20090410-112112630

Jensen, Grant J. (2009) Cell biology : protein filaments caught in the act. Science, 323 (5913). pp. 472-473. ISSN 0036-8075. https://resolver.caltech.edu/CaltechAUTHORS:20090731-083543833

2008

Gan, Lu and Chen, Songye and Jensen, Grant J. (2008) Molecular organization of Gram-negative peptidoglycan. Proceedings of the National Academy of Sciences of the United States of America, 105 (48). pp. 18953-18957. ISSN 0027-8424. PMCID PMC2596242. https://resolver.caltech.edu/CaltechAUTHORS:GANpnas08

Lee, Edwin and Fahimian, Benjamin P. and Iancu, Cristina V. et al. (2008) Radiation dose reduction and image enhancement in biological imaging through equally-sloped tomography. Journal of Structural Biology, 164 (2). pp. 221-227. ISSN 1047-8477. PMCID PMC3099251. https://resolver.caltech.edu/CaltechAUTHORS:LEEjsb08

Tivol, William F. and Briegel, Ariane and Jensen, Grant J. (2008) An improved cryogen for plunge freezing. Microscopy and Microanalysis, 14 (5). pp. 375-379. ISSN 1431-9276. PMCID PMC3058946. https://resolver.caltech.edu/CaltechAUTHORS:TIVmm08

He, Wanzhong and Ladinsky, Mark S. and Huey-Tubman, Kathryn E. et al. (2008) FcRn-mediated antibody transport across epithelial cells revealed by electron tomography. Nature, 455 (7212). pp. 542-546. ISSN 0028-0836. PMCID PMC2773227. https://resolver.caltech.edu/CaltechAUTHORS:HEWnat08

Ebersbach, Gitte and Briegel, Ariane and Jensen, Grant J. et al. (2008) A Self-Associating Protein Critical for Chromosome Attachment, Division, and Polar Organization in Caulobacter. Cell, 134 (6). pp. 956-968. ISSN 0092-8674. PMCID PMC2614312. https://resolver.caltech.edu/CaltechAUTHORS:EBEc08

Briegel, Ariane and Ding, H. Jane and Li, Zhuo et al. (2008) Location and architecture of the Caulobacter crescentus chemoreceptor array. Molecular Microbiology, 69 (1). pp. 30-41. ISSN 0950-382X. PMCID PMC3090075. https://resolver.caltech.edu/CaltechAUTHORS:20110803-163826561

Morris, Dylan M. and Jensen, Grant J. (2008) Toward a biomechanical understanding of whole bacterial cells. Annual Review of Biochemistry, 77 . pp. 583-613. ISSN 0066-4154. https://resolver.caltech.edu/CaltechAUTHORS:20090512-112554576

Yu, Zhiheng and Gonciarz, Malgorzata D. and Sundquist, Wesley I. et al. (2008) Cryo-EM Structure of Dodecameric Vps4p and Its 2:1 Complex with Vta1p. Journal of Molecular Biology, 377 (2). pp. 364-377. ISSN 0022-2836. PMCID PMC2279015. https://resolver.caltech.edu/CaltechAUTHORS:20110803-162803480

Murphy, Gavin E. and Matson, Eric G. and Leadbetter, Jared R. et al. (2008) Novel ultrastructures of Treponema primitia and their implications for motility. Molecular Microbiology, 67 (6). pp. 1184-1195. ISSN 0950-382X. PMCID PMC3082362. https://resolver.caltech.edu/CaltechAUTHORS:MURmm08

2007

Li, Zhuo and Trimble, Michael J. and Brun, Yves V. et al. (2007) The structure of FtsZ filaments in vivo suggests a force-generating role in cell division. EMBO Journal, 26 (22). pp. 4694-4708. ISSN 0261-4189. PMCID PMC2080809. https://resolver.caltech.edu/CaltechAUTHORS:20110803-153142337

Murphy, Gavin E. and Jensen, Grant J. (2007) Electron Cryotomography. BioTechniques, 43 (4). pp. 413-420. ISSN 0736-6205. https://resolver.caltech.edu/CaltechAUTHORS:20110803-161436056

Iancu, Cristina V. and Ding, H. Jane and Morris, Dylan M. et al. (2007) The Structure of Isolated Synechococcus Strain WH8102 Carboxysomes as Revealed by Electron Cryotomography. Journal of Molecular Biology, 372 (3). pp. 764-773. ISSN 0022-2836. PMCID PMC2453779. https://resolver.caltech.edu/CaltechAUTHORS:20110803-151551421

Henderson, Gregory P. and Gan, Lu and Jensen, Grant J. (2007) 3-D Ultrastructure of O. tauri: Electron Cryotomography of an Entire Eukaryotic Cell. PLoS ONE, 2 (8). Art. No. e749. ISSN 1932-6203. PMCID PMC1939878. https://resolver.caltech.edu/CaltechAUTHORS:HENplosone07

Wright, Elizabeth R. and Schooler, Jordan B. and Ding, H. Jane et al. (2007) Electron cryotomography of immature HIV-1 virions reveals the structure of the CA and SP1 Gag shells. EMBO Journal, 26 (8). pp. 2218-2226. ISSN 0261-4189. PMCID PMC1852790. https://resolver.caltech.edu/CaltechAUTHORS:20110803-142323319

Jensen, Grant J. and Briegel, Ariane (2007) How electron cryotomography is opening a new window onto prokaryotic ultrastructure. Current Opinion in Structural Biology, 17 (2). pp. 260-267. ISSN 0959-440X. https://resolver.caltech.edu/CaltechAUTHORS:20110803-144316990

Burns, David G. and Janssen, Peter H. and Itoh, Takashi et al. (2007) Haloquadratum walsbyi gen. nov., sp. nov., the square haloarchaeon of Walsby, isolated from saltern crystallizers in Australia and Spain. International Journal of Systematic and Evolutionary Microbiology, 57 (2). pp. 387-392. ISSN 1466-5026. https://resolver.caltech.edu/CaltechAUTHORS:20110803-134318931

Jensen, Grant J. (2007) A nanoengine for gliding motility. Molecular Microbiology, 63 (1). pp. 4-6. ISSN 0950-382X. https://resolver.caltech.edu/CaltechAUTHORS:JENmm07

2006

Iancu, Cristina V. and Tivol, William F. and Schooler, Jordan B. et al. (2006) Electron cryotomography sample preparation using the Vitrobot. Nature Protocols, 1 (6). pp. 2813-2819. ISSN 1754-2189. https://resolver.caltech.edu/CaltechAUTHORS:20110803-133119203

Briegel, Ariane and Prabha-Dias, D. and Li, Zhuo et al. (2006) Multiple large filament bundles observed in Caulobacter crescentus by electron cryotomography. Molecular Microbiology, 62 (1). pp. 5-14. ISSN 0950-382X. https://resolver.caltech.edu/CaltechAUTHORS:20110217-125744917

Murphy, Gavin E. and Leadbetter, Jared R. and Jensen, Grant J. (2006) In situ structure of the complete Treponema primitia flagellar motor. Nature, 442 (7106). pp. 1062-1064. ISSN 0028-0836. https://resolver.caltech.edu/CaltechAUTHORS:20110803-131941991

Henderson, Gregory P. and Jensen, Grant J. (2006) Three-dimensional structure of Mycoplasma pneumoniae's attachment organelle and a model for its role in gliding motility. Molecular Microbiology, 60 (2). pp. 376-385. ISSN 0950-382X. https://resolver.caltech.edu/CaltechAUTHORS:HENmm06

Ackerson, Christopher J. and Jadzinsky, Pablo D. and Jensen, Grant J. et al. (2006) Rigid, Specific, and Discrete Gold Nanoparticle/Antibody Conjugates. Journal of the American Chemical Society, 128 (8). pp. 2635-2640. ISSN 0002-7863. https://resolver.caltech.edu/CaltechAUTHORS:20110803-092706578

Wright, Elizabeth R. and Iancu, Cristina V. and Tivol, William F. et al. (2006) Observations on the behavior of vitreous ice at ~82 and ~12K. Journal of Structural Biology, 153 (3). pp. 241-252. ISSN 1047-8477. https://resolver.caltech.edu/CaltechAUTHORS:20110803-130902686

Iancu, Cristina V. and Wright, Elizabeth R. and Heymann, J. Bernard et al. (2006) A comparison of liquid nitrogen and liquid helium as cryogens for electron cryotomography. Journal of Structural Biology, 153 (3). pp. 231-240. ISSN 1047-8477. https://resolver.caltech.edu/CaltechAUTHORS:20110803-124019191

Komeili, Arash and Li, Zhou and Newman, Dianne K. et al. (2006) Magnetosomes Are Cell Membrane Invaginations Organized by the Actin-Like Protein MamK. Science, 311 (5758). pp. 242-245. ISSN 0036-8075. https://resolver.caltech.edu/CaltechAUTHORS:20110803-122522248

2005

Murphy, Gavin E. and Jensen, Grant J. (2005) Electron Cryotomography of the E. coli Pyruvate and 2-Oxoglutarate Dehydrogenase Complexes. Structure, 13 (12). pp. 1765-1773. ISSN 0969-2126. https://resolver.caltech.edu/CaltechAUTHORS:20110803-110300203

Iancu, Cristina V. and Wright, Elizabeth R. and Benjamin, Jordan et al. (2005) A “flip–flop” rotation stage for routine dual-axis electron cryotomography. Journal of Structural Biology, 151 (3). pp. 288-297. ISSN 1047-8477. https://resolver.caltech.edu/CaltechAUTHORS:20110803-105303474

Iancu, Cristina V. and Murphy, Gavin E. and Wright, Elizabeth R. et al. (2005) Recent advances in electron cryotomography and their application to imaging purified protein complexes, isolated organelles, and small cells. Microscopy and Microanalysis, 11 (S2). pp. 1052-1053. ISSN 1431-9276. https://resolver.caltech.edu/CaltechAUTHORS:20131112-082151375

Leong, Peter A. and Heymann, J. Bernard and Jensen, Grant J. (2005) Peach: A Simple Perl-Based System for Distributed Computation and Its Application to Cryo-EM Data Processing. Structure, 13 (4). pp. 505-511. ISSN 0969-2126. https://resolver.caltech.edu/CaltechAUTHORS:20110803-103531523

Benjamin, Jordan and Ganser-Pornillos, Barbie K. and Tivol, William F. et al. (2005) Three-dimensional Structure of HIV-1 Virus-like Particles by Electron Cryotomography. Journal of Molecular Biology, 346 (2). pp. 577-588. ISSN 0022-2836. PMCID PMC6608732. https://resolver.caltech.edu/CaltechAUTHORS:20110803-095002336

2001

Jensen, Grant J. (2001) Alignment Error Envelopes for Single Particle Analysis. Journal of Structural Biology, 133 (2-3). pp. 143-155. ISSN 1047-8477. https://resolver.caltech.edu/CaltechAUTHORS:20181213-110052609

2000

Jensen, Grant J. and Kornberg, Roger D. (2000) Defocus-gradient corrected back-projection. Ultramicroscopy, 84 (1-2). pp. 57-64. ISSN 0304-3991. https://resolver.caltech.edu/CaltechAUTHORS:20181213-110052503

1999

Poglitsch, Claudia L. and Meredith, Gavin D. and Gnatt, Averell L. et al. (1999) Electron Crystal Structure of an RNA Polymerase II Transcription Elongation Complex. Cell, 98 (6). pp. 791-798. ISSN 0092-8674. https://resolver.caltech.edu/CaltechAUTHORS:20181213-110052278

Fu, Jianhua and Gnatt, Averell L. and Bushnell, David A. et al. (1999) Yeast RNA Polymerase II at 5 Å Resolution. Cell, 98 (6). pp. 799-810. ISSN 0092-8674. https://resolver.caltech.edu/CaltechAUTHORS:20181213-132118627

1998

Jensen, Grant J. and Kornberg, Roger D. (1998) Single-particle selection and alignment with heavy atom cluster-antibody conjugates. Proceedings of the National Academy of Sciences of the United States of America, 95 (16). pp. 9262-9267. ISSN 0027-8424. PMCID PMC21326. https://resolver.caltech.edu/CaltechAUTHORS:20181213-110052175

Jensen, Grant J. and Meredith, Gavin and Bushnell, David A. et al. (1998) Structure of wild-type yeast RNA polymerase II and location of Rpb4 and Rpb7. EMBO Journal, 17 (8). pp. 2353-2358. ISSN 1460-2075. PMCID PMC1170578. https://resolver.caltech.edu/CaltechAUTHORS:20181213-110052088

1994

Yoshida, Tatsuro and Willardson, Barry M. and Wilkins, Jon F. et al. (1994) The phosphorylation state of phosducin determines its ability to block transducin subunit interactions and inhibit transducin binding to activated rhodopsin. Journal of Biological Chemistry, 269 (39). pp. 24050-24057. ISSN 0021-9258. https://resolver.caltech.edu/CaltechAUTHORS:20181213-105800611

This list was generated on Thu Aug 6 21:50:20 2020 PDT.