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Number of items: 66.


Abedi, Mohamad H. and Lee, Justin and Piraner, Dan I. et al. (2020) Thermal Control of Engineered T-cells. ACS Synthetic Biology . ISSN 2161-5063. (In Press)

Salahshoor, Hossein and Shapiro, Mikhail G. and Ortiz, Michael (2020) Transcranial Focused Ultrasound Generates Skull-Conducted Shear Waves: Computational Model and Implications for Neuromodulation. Applied Physics Letters, 117 (3). Art. No. 033702. ISSN 0003-6951.

Lakshmanan, Anupama and Jin, Zhiyang and Nety, Suchita P. et al. (2020) Acoustic biosensors for ultrasound imaging of enzyme activity. Nature Chemical Biology . ISSN 1552-4450. (In Press)

Yoo, Sangjin and Mittelstein, David R. and Hurt, Robert et al. (2020) Focused ultrasound excites neurons via mechanosensitive calcium accumulation and ion channel amplification. . (Unpublished)

Norman, Sumner L. and Maresca, David and Christopoulos, Vasileios N. et al. (2020) Single Trial Decoding of Movement Intentions Using Functional Ultrasound Neuroimaging. . (Unpublished)

Szablowski, Jerzy and Lee-Gosselin, Audrey and Lue, Brian et al. (2020) Acoustically Targeted Chemogenetics for Noninvasive Control of Neural Circuits. Biological Psychiatry, 87 (9). S95. ISSN 0006-3223.

Abedi, Mohamad H. and Lee, Justin and Piraner, Dan I. et al. (2020) Thermal Control of T-cell Immunotherapy. . (Unpublished)

Maresca, David and Payen, Thomas and Lee-Gosselin, Audrey et al. (2020) Acoustic biomolecules enhance hemodynamic functional ultrasound imaging of neural activity. NeuroImage, 209 . Art. No. 116467. ISSN 1053-8119. PMCID PMC6955150.

Schibber, E. F. and Mittelstein, D. R. and Gharib, M. et al. (2020) A dynamical model of oncotripsy by mechanical cell fatigue: selective cancer cell ablation by low-intensity pulsed ultrasound. Proceedings of the Royal Society A: Mathematical, physical, and engineering sciences, 476 (2236). Art. No. 20190692. ISSN 1364-5021. PMCID PMC7209139.

Davis, Hunter C. and Kang, Sunghwi and Lee, Jae-Hyun et al. (2020) Nanoscale Heat Transfer from Magnetic Nanoparticles and Ferritin in an Alternating Magnetic Field. Biophysical Journal, 118 (6). pp. 1502-1510. ISSN 0006-3495. PMCID PMC7091488 .

Zhang, Shuai and Huang, An and Bar-Zion, Avinoam et al. (2020) The Vibration Behavior of Sub-Micrometer Gas Vesicles in Response to Acoustic Excitation Determined via Laser Doppler Vibrometry. Advanced Functional Materials, 30 (13). Art. No. 2000239. ISSN 1616-301X.

Lu, George Jiaozhi and Chou, Li-dek and Malounda, Dina et al. (2020) Genetically Encodable Contrast Agents for Optical Coherence Tomography. ACS Nano . ISSN 1936-0851. (In Press)

Sharma, Saransh and Ding, Grace and Telikicherla, Aditya et al. (2020) 3D Surgical Alignment with 100µm Resolution Using Magnetic-Field Gradient-Based Localization. In: 2020 IEEE International Solid-State Circuits Conference. IEEE , Piscataway, NJ, pp. 318-320. ISBN 9781728132051.

Mittelstein, David R. and Ye, Jian and Schibber, Erika F. et al. (2020) Selective Ablation of Cancer Cells with Low Intensity Pulsed Ultrasound. Applied Physics Letters, 116 (1). Art. No. 013701. ISSN 0003-6951.


Farhadi, Arash and Bedrossian, Manuel and Lee, Justin et al. (2019) Genetically encoded phase contrast agents for digital holographic microscopy. . (Unpublished)

Piraner, Dan I. and Wu, Yan and Shapiro, Mikhail G. (2019) Modular Thermal Control of Protein Dimerization. ACS Synthetic Biology, 8 (10). pp. 2256-2262. ISSN 2161-5063.

Farhadi, Arash and Ho, Gabrielle H. and Sawyer, Daniel P. et al. (2019) Ultrasound Imaging of Gene Expression in Mammalian Cells. Science, 365 (6460). pp. 1469-1475. ISSN 0036-8075. PMCID PMC6860372.

Szablowski, Jerzy O. and Bar-Zion, Avinoam and Shapiro, Mikhail G. (2019) Achieving Spatial and Molecular Specificity with Ultrasound-Targeted Biomolecular Nanotherapeutics. Accounts of Chemical Research, 52 (9). pp. 2427-2434. ISSN 0001-4842.

Wu, Di and Baresch, Diego and Cook, Colin et al. (2019) Genetically encoded nanostructures enable acoustic manipulation of engineered cells. . (Unpublished)

Bar-Zion, Avinoam and Nourmahnad, Atousa and Mittelstein, David R. et al. (2019) Acoustically Detonated Biomolecules for Genetically Encodable Inertial Cavitation. . (Unpublished)

Lu, George J. and Chou, Li-dek and Malounda, Dina et al. (2019) Biomolecular Contrast Agents for Optical Coherence Tomography. . (Unpublished)

Nadeau, Jay L. and Bedrossian, Manuel and Farhadi, Arash et al. (2019) Using the Gouy phase shift to estimate gas vesicle concentrations in salmonella (Conference Presentation). In: Quantitative Phase Imaging V. Proceedings of SPIE. No.10887. Society of Photo-optical Instrumentation Engineers (SPIE) , Bellingham, WA, Art. No. 1088706. ISBN 9781510624160.


Kunth, Martin and Lu, George J. and Witte, Christopher et al. (2018) Protein Nanostructures Produce Self-Adjusting Hyperpolarized Magnetic Resonance Imaging Contrast through Physical Gas Partitioning. ACS Nano, 12 (11). pp. 10939-10948. ISSN 1936-0851.

Maresca, David and Sawyer, Daniel P. and Renaud, Guillaume et al. (2018) Nonlinear X-Wave Ultrasound Imaging of Acoustic Biomolecules. Physical Review X, 8 (4). Art. No. 041002. ISSN 2160-3308.

Ramesh, Pradeep and Hwang, Son-Jong and Davis, Hunter C. et al. (2018) Ultraparamagnetic cells formed through intracellular oxidation and chelation of paramagnetic iron. Angewandte Chemie International Edition, 57 (38). pp. 12385-12389. ISSN 1433-7851.

Lu, George and Farhadi, Arash and Szablowski, Jerzy et al. (2018) Genetically encoded acousto-magnetic protein nanostructures for non-invasive imaging of cellular functions. In: 256th American Chemical Society National Meeting & Exposition, 19-23 August 2018, Boston, MA.

Lu, George J. and Farhadi, Arash and Mukherjee, Arnab et al. (2018) Proteins, air and water: reporter genes for ultrasound and magnetic resonance imaging. Current Opinion in Chemical Biology, 45 . pp. 57-63. ISSN 1367-5931. PMCID PMC6076850.

Farhadi, Arash and Ho, Gabrielle and Kunth, Martin et al. (2018) Recombinantly Expressed Gas Vesicles as Nanoscale Contrast Agents for Ultrasound and Hyperpolarized MRI. AIChE Journal, 64 (8). pp. 2927-2933. ISSN 0001-1541. PMCID PMC6289519.

Szablowski, Jerzy O. and Lee-Gosselin, Audrey and Lue, Brian et al. (2018) Acoustically Targeted Chemogenetics for Noninvasive Control of Neural Circuits. Nature Biomedical Engineering, 2 (7). pp. 475-484. ISSN 2157-846X.

Sato, Tomokazu and Shapiro, Mikhail G. and Tsao, Doris Y. (2018) Ultrasonic Neuromodulation Causes Widespread Cortical Activation via an Indirect Auditory Mechanism. Neuron, 98 (5). pp. 1031-1041. ISSN 0896-6273.

Maresca, David and Lakshmanan, Anupama and Abedi, Mohamad et al. (2018) Biomolecular Ultrasound and Sonogenetics. Annual Review of Chemical and Biomolecular Engineering, 9 . pp. 229-252. ISSN 1947-5438. PMCID PMC6086606.

Lu, George Jiaozhi and Farhadi, Arash and Szablowski, Jerzy O. et al. (2018) Acoustically modulated magnetic resonance imaging of gas-filled protein nanostructures. Nature Materials, 17 (5). pp. 456-463. ISSN 1476-1122. PMCID PMC6015773.

Le Floc’h, Johann and Zlitni, Aimen and Bilton, Holly A. et al. (2018) In vivo Biodistribution of Radiolabeled Acoustic Protein Nanostructures. Molecular Imaging and Biology, 20 (2). pp. 230-239. ISSN 1536-1632. PMCID PMC6110388.

Davis, Hunter C. and Ramesh, Pradeep and Bhatnagar, Aadyot et al. (2018) Mapping the microscale origins of magnetic resonance image contrast with subcellular diamond magnetometry. Nature Communications, 9 . Art. No. 131. ISSN 2041-1723. PMCID PMC5760582.

Bourdeau, Raymond W. and Lee-Gosselin, Audrey and Lakshmanan, Anupama et al. (2018) Acoustic reporter genes for noninvasive imaging of microorganisms in mammalian hosts. Nature, 553 . pp. 86-90. ISSN 0028-0836. PMCID PMC5920530.

Ojala, David S. and Sun, Sabrina and Santiago-Ortiz, Jorge L. et al. (2018) In Vivo Selection of a Computationally Designed SCHEMA AAV Library Yields a Novel Variant for Infection of Adult Neural Stem Cells in the SVZ. Molecular Therapy, 26 (1). pp. 304-319. ISSN 1525-0016. PMCID PMC5762983.


Shapiro, Mikhail G. and Homma, Kazuaki and Villarreal, Sebastian et al. (2017) Correspondence: Reply to ‘Revisiting the theoretical cell membrane thermal capacitance response’. Nature Communications, 8 . Art. No. 1432. ISSN 2041-1723. PMCID PMC5681563.

Mukherjee, Arnab and Davis, Hunter C. and Ramesh, Pradeep et al. (2017) Biomolecular MRI reporters: Evolution of new mechanisms. Progress in Nuclear Magnetic Resonance Spectroscopy, 102-103 . pp. 32-42. ISSN 0079-6565. PMCID PMC5726449.

Piraner, Dan I. and Farhadi, Arash and Davis, Hunter C. et al. (2017) Going Deeper: Biomolecular Tools for Acoustic and Magnetic Imaging and Control of Cellular Function. Biochemistry, 56 (39). pp. 5202-5209. ISSN 0006-2960. PMCID PMC6058970.

Lakshmanan, Anupama and Lu, George J. and Farhadi, Arash et al. (2017) Preparation of biogenic gas vesicle nanostructures for use as contrast agents for ultrasound and MRI. Nature Protocols, 12 (10). pp. 2050-2080. ISSN 1754-2189. PMCID PMC6185898.

Yoo, Sangjin and Sato, Tomo and Tsao, Doris et al. (2017) Elucidating the biophysical mechanisms of ultrasonic neuromodulation. In: 2017 IEEE International Ultrasonics Symposium (IUS). IEEE , Piscataway, NJ. ISBN 978-1-5386-3383-0.

Lakshmanan, Anupama and Nety, Suchita P. and Maresca, David et al. (2017) Engineering acoustic biomolecules as dynamic molecular sensors for ultrasound. In: 2017 IEEE International Ultrasonics Symposium (IUS). IEEE , Piscataway, NJ. ISBN 978-1-5386-3383-0.

Monge, Manuel and Lee-Gosselin, Audrey and Shapiro, Mikhail G. et al. (2017) Localization of Microscale Devices In Vivo using Addressable Transmitters Operated as Magnetic Spins. Nature Biomedical Engineering, 1 (9). pp. 736-744. ISSN 2157-846X.

Maley, Adam M. and Lu, George J. and Shapiro, Mikhail G. et al. (2017) Characterizing Single Polymeric and Protein Nanoparticles with Surface Plasmon Resonance Imaging Measurements. ACS Nano, 11 (7). pp. 7447-7456. ISSN 1936-0851. PMCID PMC5531002.

Shapiro, Mikhail G. (2017) Gas vesicles: Acoustic biomolecules for ultrasound imaging. Journal of the Acoustical Society of America, 141 (5). Art. No. 3953. ISSN 0001-4966.

Gilad, Assaf A. and Shapiro, Mikhail G. (2017) Molecular Imaging in Synthetic Biology, and Synthetic Biology in Molecular Imaging. Molecular Imaging and Biology, 19 (3). pp. 373-378. ISSN 1536-1632. PMCID PMC6058969.

Cherin, Emmanuel and Melis, Johan M. and Bourdeau, Raymond W. et al. (2017) Acoustic Behavior of Halobacterium salinarum Gas Vesicles in the High-Frequency Range: Experiments and Modeling. Ultrasound in Medicine and Biology, 43 (5). pp. 1016-1030. ISSN 0301-5629. PMCID PMC5385285.

Chen, Yvonne Y. and Shapiro, Mikhail G. and Ruder, Warren et al. (2017) What Is the Role of Circuit Design in the Advancement of Synthetic Biology? Part 1. Cell Systems, 4 (4). pp. 370-372. ISSN 2405-4712.

Piraner, Dan and Abedi, Mohamad H. and Shapiro, Mikhail G. (2017) Tunable Thermal Bioswitches for In Vivo Control of Bacterial Therapeutics. Cell Systems, 4 (2). p. 143. ISSN 2405-4712.

Maresca, David and Lakshmanan, Anupama and Lee-Gosselin, Audrey et al. (2017) Nonlinear ultrasound imaging of nanoscale acoustic biomolecules. Applied Physics Letters, 110 (7). Art. No. 073704. ISSN 0003-6951. PMCID PMC5315666.

Barskiy, Danila A. and Coffey, Aaron M and Nikolaou, Panayiotis et al. (2017) NMR Hyperpolarization Techniques of Gases. Chemistry: a European Journal, 23 (4). pp. 725-751. ISSN 0947-6539. PMCID PMC5462469.

Piraner, Dan I. and Abedi, Mohamad H. and Moser, Brittany A. et al. (2017) Tunable thermal bioswitches for in vivo control of microbial therapeutics. Nature Chemical Biology, 13 (1). pp. 75-80. ISSN 1552-4450.


Mukherjee, Arnab and Wu, Di and Davis, Hunter C. et al. (2016) Non-invasive imaging using reporter genes altering cellular water permeability. Nature Communications, 7 . Art. No. 13891. ISSN 2041-1723. PMCID PMC5196229.

Lakshmanan, Anupama and Farhadi, Arash and Nety, Suchita P. et al. (2016) Molecular Engineering of Acoustic Protein Nanostructures. ACS Nano, 10 (8). pp. 7314-7322. ISSN 1936-0851. PMCID PMC6058967.

Shapiro, Mikhail (2016) Genetically encoded nanostructures for non-invasive imaging of biological systems. In: 252nd American Chemical Society National Meeting & Exposition, 21-25 August 2016, Philadelphia, PA.


Shapiro, Mikhail G. and Ramirez, R. Matthew and Sperling, Lindsay J. et al. (2014) Genetically encoded reporters for hyperpolarized xenon magnetic resonance imaging. Nature Chemistry, 6 (7). pp. 629-634. ISSN 1755-4330.

Shapiro, Mikhail G. and Goodwill, Patrick W. and Neogy, Arkosnato et al. (2014) Biogenic gas nanostructures as ultrasonic molecular reporters. Nature Nanotechnology, 9 (4). pp. 311-316. ISSN 1748-3387. PMCID PMC4023545.

Shapiro, Mikhail G. (2014) Genetically Encoded Gas Nanostructures as Biophyically Tunable Molecular Reporters for MRI and Ultrasound. Biophysical Journal, 106 (2). 19A. ISSN 0006-3495.


Marblestone, Adam H. and Zamft, Bradley M. and Maguire, Yael G. et al. (2013) Physical principles for scalable neural recoding. Frontiers in Computational Neuroscience, 7 . Art. No. 137. ISSN 1662-5188. PMCID PMC3807567.

Shapiro, Mikhail G. and Priest, Michael F. and Siegel, Peter H. et al. (2013) Thermal Mechanisms of Millimeter Wave Stimulation of Excitable Cells. Biophysical Journal, 104 (12). pp. 2622-2628. ISSN 0006-3495. PMCID PMC3686354.

Romero, Philip A. and Shapiro, Mikhail G. and Arnold, Frances H. et al. (2013) Directed Evolution of Protein-Based Neurotransmitter Sensors for MRI. In: Chemical Neurobiology : Methods and Protocols. Methods in Molecular Biology. No.995. Springer , New York, NY, pp. 193-205. ISBN 978-1-62703-344-2. PMCID PMC3818115.


Shapiro, Mikhail G. and Frazier, Shawnalea J. and Lester, Henry A. (2012) Unparalleled Control of Neural Activity Using Orthogonal Pharmacogenetics. ACS Chemical Neuroscience, 3 (8). pp. 619-629. ISSN 1948-7193. PMCID PMC3419455.

Shapiro, Mikhail G. and Homma, Kazuaki and Villarreal, Sebastian et al. (2012) Infrared light excites cells by changing their electrical capacitance. Nature Communications, 3 . Art. No. 736. ISSN 2041-1723. PMCID PMC3316879; PMC5684604.


Shapiro, Mikhail G. and Westmeyer, Gil G. and Romero, Philip A. et al. (2010) Directed evolution of a magnetic resonance imaging contrast agent for noninvasive imaging of dopamine. Nature Biotechnology, 28 (3). pp. 264-270. ISSN 1087-0156. PMCID PMC3073400.


Shapiro, Mikhail G. and Szablowski, Jerzy O. and Langer, Robert et al. (2009) Protein Nanoparticles Engineered to Sense Kinase Activity in MRI. Journal of the American Chemical Society, 131 (7). pp. 2484-2486. ISSN 0002-7863. PMCID PMC2662502.


Shapiro, Mikhail G. and Atanasijevic, Tatjana and Faas, Henryk et al. (2006) Dynamic imaging with MRI contrast agents: quantitative considerations. Magnetic Resonance Imaging, 24 (4). pp. 449-462. ISSN 0730-725X.

This list was generated on Mon Aug 3 07:58:52 2020 PDT.