Published April 2025 | Published
Journal Article Open

Merging Vibrational Spectroscopy with Fluorescence Microscopy: Combining the Best of Two Worlds

  • 1. ROR icon Columbia University
  • 2. ROR icon Peking University
  • 3. ROR icon California Institute of Technology
  • 4. ROR icon Shanghai Medical College of Fudan University

Abstract

Vibrational spectroscopy and fluorescence spectroscopy have historically been two established but separate fields of molecular spectroscopy. While vibrational spectroscopy provides exquisite chemical information, fluorescence spectroscopy often offers orders of magnitude higher detection sensitivity. However, they each lack the advantages of each other. In recent years, a series of novel nonlinear optical spectroscopy studies have been developed that merge both spectroscopies into a single double-resonance process. These techniques combine the chemical specificity of Raman or infrared (IR) spectroscopy with the superb detection sensitivity and spatial resolution of fluorescence microscopy. Many facets have been explored, including Raman transition versus IR transition, time domain versus frequency domain, and spectroscopy versus microscopy. Notably, single-molecule vibrational spectroscopy has been achieved at room temperature without the need for plasmonics. Even super-resolution vibrational imaging beyond the diffraction limit was demonstrated. This review summarizes the growing field of vibrational-encoded fluorescence microscopy, including key technical developments, emerging applications, and future prospects.

Copyright and License

© 2025 by the author(s). This work is licensed under a Creative Commons Attribution 4.0 International License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. See credit lines of images or other third-party material in this article for license information.

Acknowledgement

W.M. acknowledges support from the Air Force Office of Scientific Research (grant FA9550-21-1-0170), the Chan Zuckerberg Initiative (Dynamic Imaging 2023-321166), and the National Institutes of Health (R35 GM149256). The authors thank Sunney Xie, Xiaoyang Zhu, Louis Brus, and Chang Yan for helpful discussions.

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Additional details

Created:
July 8, 2025
Modified:
July 8, 2025