Microbial Cycling of Sulfur and Other Redox-Sensitive Elements in Porewaters of San Clemente Basin, California, and Cocos Ridge, Costa Rica
Creators
Abstract
The microbial recycling of organic matter in marine sediments depends upon electron acceptors that are utilized based on availability and energetic yield. Since sulfate is the most abundant oxidant once oxygen has been depleted, the sulfide produced after sulfate reduction becomes an important electron donor for autotrophic microbes. The ability of sulfide to be re‐oxidized through multiple metabolic pathways and intermediates with variable oxidation states prompts investigation into which species are preferentially utilized and what are the factors that determine the fate of reduced sulfur species. Quantifying these sulfur intermediates in porewaters is a critical first step towards achieving a more complete understanding of the oxidative sulfur cycle, yet this has been accomplished in very few studies, none of which include oligotrophic sedimentary environments in the open ocean. Here we present profiles of porewater sulfur intermediates from sediments underlying oligotrophic regions of the ocean, which encompass about 75% of the ocean's surface and are characterized by low nutrient levels and productivity. Aiming at addressing uncertainties about if and how sulfide produced by the degradation of scarce sedimentary organic matter plays a role in carbon fixation in the sediment, we determine depth profiles of redox‐sensitive metals and sulfate isotope compositions and integrate these datasets with 16S rRNA microbial community composition data and solid‐phase sulfur concentrations. We did not find significant correlations between sulfur species or trace metals and specific sulfur cycling taxa, which suggests that microorganisms in pelagic and oxic sediments may be generalists utilizing flexible metabolisms to oxidize organic matter through different electron acceptors.
Copyright and License
© 2025 John Wiley & Sons Ltd.
Acknowledgement
We thank the science party and the crew on board the R/V Sally Ride, cruise SR2113, for assistance with sample collection. We thank William Gray for help with the gravity core deployment and retrieval. We are indebted to Stephanie Connon for help with DNA sample preparation for sequencing, Fenfang Wu for help with the EA-IRMS operation, and Dana Brenner for help with the oxygen isotope measurements. We also thank Selva Marroquin, as well as the Adkins, Berelson, and Orphan labs for fruitful discussions, particularly Aditi Narayanan, Rebecca Wipfler, and John Magyar. We further thank three anonymous reviewers for comments that greatly improved this manuscript. This work was funded by NSF grant OCE-1559215.
Funding
This work was funded by NSF grant OCE-1559215.
Data Availability
All data and custom scripts were collected and stored using Git version control. Code for raw data processing, analysis, and figure generation is available in the repository (https://github.com/daniosro/S_cycling_SCB_CR).
Supplemental Material
Data S1 (DOCX)
Files
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Additional details
Identifiers
- PMID
- 39973161
Related works
- Describes
- Journal Article: 39973161 (PMID)
- Is supplemented by
- Software: https://github.com/daniosro/S_cycling_SCB_CR (URL)
- Supplemental Material: https://onlinelibrary.wiley.com/action/downloadSupplement?doi=10.1111%2Fgbi.70013&file=gbi70013-sup-0001-Supinfo.docx (URL)
Funding
- National Science Foundation
- OCE‐1559215
Dates
- Accepted
-
2025-02-06
- Available
-
2025-02-19Version of record online
- Available
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2025-02-19Issue online