Published May 2, 2024 | Published
Journal Article Open

Argentophilic Interactions, Flexibility, and Dynamics of Pyrrole Cages Encapsulating Silver(I) Clusters

An error occurred while generating the citation.

Abstract

Recently, pyrrole cages have been synthesized that encapsulate ion pairs and silver(I) clusters to form intricate supramolecular capsules. We report here a computational analysis of these structures using density functional theory combined with a semiempirical tight-binding approach. We find that for neutral pyrrole cages, the Gibbs free energies of formation provide reliable predictions for the ratio of bound ions. For charged pyrrole cages, we find strong argentophilic interactions between Ag ions on the basis of the calculated bond indices and molecular orbitals. For the cage with the Ag4 cluster, we find two minimum-geometry conformations that differ by only 6.5 kcal/mol, with an energy barrier <1 kcal/mol, suggesting a very flexible structure as indicated by molecular dynamics. The predicted energies of formation of [Agn1]n-3+ (n = 1–5) cryptands provide low energy barriers of formation of 5–20 kcal/mol for all cases, which is consistent with the experimental data. Furthermore, we also examined the structural variability of mixed-valence silver clusters to test whether additional geometrical conformations inside the organic cage are thermodynamically accessible. In this context, we show that the time-dependent density functional theory UV–vis spectra may potentially serve as a diagnostic probe to characterize mixed-valence and geometrical configurations of silver clusters encapsulated into cryptands.

Copyright and License

© 2024 The Authors. Published by American Chemical Society. This publication is licensed under CC-BY 4.0.

Acknowledgement

B.T. and W.A.G. III acknowledge funding from the University of Warsaw under the “Excellence Initiative–Research University” (IDUB) Programme “Tandems for Excellence”. B.T. and J.P.M. acknowledge the National Science Center (Poland) Grant UMO-2018/29/B/ST4/00805. B.S. and A.S. acknowledge support from the National Science Center (Poland) under Grant Agreement UMO-2020/38/E/ST4/00024. W.A.G. III thanks NSF (CBET 2311117) for support.

Contributions

The manuscript was written through contributions of all authors. All authors have given approval to the final version of the manuscript

Data Availability

  • Bond orders, partial charges, interaction energies, DFT characterization, and TDDFT spectra for studied systems. Graphical analysis of MD runs and potential energy surfaces of Ag+ ions exiting the cavity of 1 (PDF)

  • Cartesian coordinates of all studied systems (XYZ)

  • Animation of MD runs and Ag+ ions exiting the cavity of 1 (MP4)

  • Animation of MD runs and Ag+ ions exiting the cavity of 1 (MP4)

  • Animation of MD runs and Ag+ ions exiting the cavity of 1 (MP4)

  • Animation of MD runs and Ag+ ions exiting the cavity of 1 (MP4)

  • Animation of MD runs and Ag+ ions exiting the cavity of 1 (MP4)

  • Animation of MD runs and Ag+ ions exiting the cavity of 1 (MP4)

Conflict of Interest

The authors declare no competing financial interest.

Files

trzaskowski-et-al-2024-argentophilic-interactions-flexibility-and-dynamics-of-pyrrole-cages-encapsulating-silver(i).pdf
Files (15.6 MB)
Name Size Download all
md5:95f62561070192599c63731b5527f650
747.9 kB Download
md5:c0321c19882e76e91d7b3395f7ef1978
838.0 kB Download
md5:a7bf757b1ce27fdc52bdca6a94df888e
684.9 kB Download
md5:d91506f1b7d0c2aefb6124ec87686228
4.0 MB Preview Download
md5:790b01132ec0733830a91be280829b2c
7.0 MB Preview Download
md5:623e8545858505fb18d15469df256f65
732.2 kB Download
md5:cddcc9505870e8fc8b37af95c00a77c2
707.7 kB Download
md5:618a18ac454676475b07c4d883eed28c
707.0 kB Download
md5:82717bcd7c7fe5367717aff486bb4da2
210.7 kB Download

Additional details

Created:
May 24, 2024
Modified:
June 28, 2024