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Published December 2024 | Published
Journal Article Open

Harmonic imaging for nonlinear detection of acoustic biomolecules

Abstract

Gas vesicles (GVs) based on acoustic reporter genes have emerged as potent contrast agents for cellular and molecular ultrasound imaging. These air-filled, genetically encoded protein nanostructures can be expressed in a variety of cell types in vivo to visualize cell location and activity or injected systemically to label and monitor tissue function. Distinguishing GV signal from tissue deep inside intact organisms requires imaging approaches such as amplitude modulation (AM) or collapse-based pulse sequences. However, these approaches have limitations either in sensitivity or require the destruction of GVs, restricting the imaging of dynamic cellular processes. To address these limitations, we developed harmonic imaging to enhance the sensitivity of nondestructive GV imaging. We hypothesized that harmonic imaging, integrated with AM, could significantly elevate GV detection sensitivity by leveraging the nonlinear acoustic response of GVs. We tested this hypothesis by imaging tissue-mimicking phantoms embedded with purified GVs, mammalian cells genetically modified to express GVs, and mice liver in vivo post-systemic infusion of GVs. Our findings reveal that harmonic cross-propagating wave AM (HxAM) imaging markedly surpasses traditional xAM in isolating GVs' nonlinear acoustic signature, demonstrating significant (p < 0.05) enhancements in imaging performance. HxAM imaging improves detection of GV producing cells up to three folds in vitro, enhances in vivo imaging performance by over 10 dB, while extending imaging depth by up to 20%. Investigation into the backscattered spectra further elucidates the advantages of harmonic imaging. These advancements bolster ultrasound's capability in molecular and cellular imaging, underscoring the potential of harmonic signals to improve GV detection.

Copyright and License

© 2024 Author(s). All article content, except where otherwise noted, is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International (CC BY-NC-ND) license.

Funding

This research was supported by the National Institutes of Health (Grant No. R01-EB018975 to M.G.S.) and the Chan Zuckerberg Initiative. M.G.S. is a Howard Hughes Medical Institute Investigator.

Contributions

Rohit Nayak: Conceptualization (lead); Data curation (lead); Formal analysis (lead); Methodology (lead); Software (lead); Validation (lead); Visualization (lead); Writing – original draft (lead); Writing – review & editing (lead). Mengtong Duan: Methodology (equal); Writing – review & editing (equal). Bill Ling: Methodology (supporting); Writing – review & editing (supporting). Zhiyang Jin: Methodology (supporting); Writing – review & editing (supporting). Dina Malounda: Methodology (supporting); Writing – review & editing (supporting). Mikhail G. Shapiro: Conceptualization (equal); Funding acquisition (equal); Investigation (equal); Project administration (equal); Resources (equal); Supervision (equal); Writing – original draft (equal); Writing – review & editing (equal).

Supplemental Material

See the supplementary material for additional experimental data that support the primary findings reported in this study, which includes the following: 1. Impact of averaging repeats on xAM and HxAM imaging: An analysis of how varying the number of averaging repeats impacts image quality, demonstrating that HxAM consistently outperforms xAM regardless of the number of repeats. 2. Harmonics imaging of wild type GVs: A validation study showing that wild-type gas vesicles (wtGVs), which lack nonlinear buckling, do not enhance HxAM imaging, as expected. 3. Harmonics imaging using parabolic AM pulse sequences: An in vitro assessment comparing parabolic AM (pAM) and xAM pulse sequences, in the context of harmonic imaging and its impact on imaging performance. 4. Elevational and lateral beam profile measurement: Beam profile measurements conducted using a fiber-optic hydrophone, detailing the beam characteristics for both xAM and HxAM imaging. 5. In Vitro imaging of engineered MDA cells expressing acoustic reporter genes: Ultrasound imaging of engineered MDA cells post-GV collapse, demonstrating that advantages of harmonic imaging disappear in the absence of GVs. 6. In vivo imaging of mice liver: Additional data from imaging of intravenously injected GVs in the mouse liver, highlighting the distinct harmonic signals observed in HxAM images.

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Additional details

Created:
December 19, 2024
Modified:
December 19, 2024