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Published May 29, 2024 | Published
Journal Article Open

Discovery and Characterization of Pyridoxal 5′-Phosphate-Dependent Cycloleucine Synthases

Abstract

Pyridoxal 5′-phosphate (PLP)-dependent enzymes are the most versatile biocatalysts for synthesizing nonproteinogenic amino acids. α,α-Disubstituted quaternary amino acids, such as 1-aminocyclopentane-1-carboxylic acid (cycloleucine), are useful building blocks for pharmaceuticals. In this study, starting with the biosynthesis of fusarilin A, we discovered a family of PLP-dependent enzymes that can facilitate tandem carbon–carbon forming steps to catalyze an overall [3 + 2]-annulation. In the first step, the cycloleucine synthases use SAM as the latent electrophile and an in situ-generated enamine as the nucleophile for γ-substitution. Whereas previously characterized γ-replacement enzymes protonate the resulting α-carbon and release the acyclic amino acid, cycloleucine synthases can catalyze an additional, intramolecular aldol or Mannich reaction with the nucleophilic α-carbon to form the substituted cyclopentane. Overall, the net [3 + 2]-annulation reaction can lead to 2-hydroxy or 2-aminocycloleucine products. These studies further expand the biocatalytic scope of PLP-dependent enzymes.

Copyright and License

© 2024 American Chemical Society.

Acknowledgement

This work was supported by the NIGMS 5R35GM118056 to Y.T. MicroED work was supported by the Packard Foundation and Pew Foundation to H.M.N. Chemical characterization studies were supported by shared instrumentation grants from the NSF (CHE-1048804).

Contributions

All authors contributed to writing and approval of the submitted manuscript. A.N.D.A. and K.S. contributed equally.

Data Availability

  • Additional experimental details, materials, and methods, including photographs of experimental setup; 1D, 2D NMR spectra for all compounds; MicroED structures of 2 and 4-Br-Bz-11 were deposited to CCDC (PDF)

 

Accession Codes

CCDC 2332145 and 2332147 contain the supplementary crystallographic data for this paper.

Conflict of Interest

The authors declare no competing financial interest

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Additional details

Created:
May 24, 2024
Modified:
June 4, 2024