Widespread detoxifying NO reductases impart a distinct isotopic fingerprint on N₂O under anoxia
Abstract
Nitrous oxide (N2O), a potent greenhouse gas, can be generated by compositionally complex microbial populations in diverse contexts. Accurately tracking the dominant biological sources of N2O has the potential to improve our understanding of N2O fluxes from soils as well as inform the diagnosis of human infections. Isotopic “Site Preference” (SP) values have been used towards this end, as bacterial and fungal nitric oxide reductases produce N2O with different isotopic fingerprints. Here we show that flavohemoglobin, a hitherto biogeochemically neglected yet widely distributed detoxifying bacterial NO reductase, imparts a distinct SP value onto N2O under anoxic conditions that correlates with typical environmental N2O SP measurements. We suggest a new framework to guide the attribution of N2O biological sources in nature and disease.
Copyright and License
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
Acknowledgement
We thank Colette L. Kelly for valuable guidance and help with the scrambling correction; Nami Kitchen for assistance with IRMS measurements; and Nathan Hart at the Caltech Glass Shop for building the vacuum flasks. We thank the Dr. Tsui-Fen Chou and Baiyi Quan at the Caltech Proteome Exploration Laboratory for assistance with proteomics-based experiments.
Funding
National Science Foundation Graduate Research Fellowship Program (RZW), Jane Coffin Childs Memorial Fund for Medical Research Fellowship (ZRL), National Institutes of Health grant R01 HL152190-03 (DKN, JML)
Contributions
Conceptualization: DKN, JME, RZW, ZRL
Methodology: RZW, ZRL, SAW
Investigation: RZW, ZRL, SAW, DKN
Visualization: RZW, ZRL, DKN, JME
Funding acquisition: DKN, JME, RZW, ZRL
Project administration: DKN
Supervision: DKN, JME
Writing – original draft: RZW, ZRL
Writing – review & editing: RZW, ZRL, DKN, JME
Conflict of Interest
Authors declare that they have no competing interests.
Data Availability
All data are available in the main text or the supplementary materials.
Supplementary Materials
Materials and Methods
Supplementary Text
Figs. S1 to S18
Tables S1 to S13
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Additional details
- PMCID
- PMC10592819
- National Science Foundation
- NSF Graduate Research Fellowship
- Jane Coffin Childs Memorial Fund for Medical Research
- National Institutes of Health
- R01 HL152190-03
- Caltech groups
- Division of Geological and Planetary Sciences, Division of Biology and Biological Engineering