Human cerebellar organoids with functional Purkinje cells
Abstract
Copyright and License
© 2023 Elsevier.
Acknowledgement
We thank Karl Herold, Kelsey Hiton, Nicolette Pirjanian, and Tiantian Xu for experimental assistance. We thank Kuo-Chang Tseng for computational and imaging assistance. We thank current/former members of the Quadrato lab for insightful discussions and feedback. We thank Cristy Lytal for editing the manuscript. We thank Seth Walter Ruffins and the Optical Imaging Facility at USC for providing guidance and support of imaging analyses. We thank Kirsten Frieda at Spatial Genomics for being the point-person on the spatial transcriptomics portion of the project. We thank Justin Ichida, Jasper Janssens, and Yifu Han for thoughtful feedback on experimental design. We thank Prof. Huizhong Tao from Zilkha Neurogenetic Institute, USC, for sharing the patch-clamp setup and Dr. Can Tao, who provided essential suggestions for patch-clamp recordings. We thank our funding sources for allowing us to conduct our research: the Robert E. and May R. Wright Foundation, the Eli and Edythe Broad Foundation, and the Edward Mallinckdot, Jr. Foundation. The graphical abstract was made using BioRender.
Contributions
A.A., M.B., and G.Q. conceived the experiments. A.A., N.H., A.S., and A.D. generated, cultured, and characterized all organoids used in this study. A.A. and T.N. performed scRNA-seq experiments. T.N. performed scRNA-seq analysis and worked on cell type assignments and data analysis with assistance from A.A. S.P. performed sample preparation for spatial transcriptomics, whereas N.T. and R.T. performed analysis of the spatial transcriptomics. M.B., N.H., and R.S. performed the calcium imaging and analysis. M.B. conducted whole-cell patch-clamp recordings and analysis. M.P.C. generated the D2 iPSC line. C.L. designed and generated the constructs to optogenetically silence Purkinje neurons and produced lentiviral particles to infect organoids. G.Q. supervised all aspects of the project. A.A., M.B., and G.Q. wrote the manuscript with contributions from all authors.
Conflict of Interest
The following patent has been filed by A.A. and G.Q.: U.S. Provisional Application Serial No. 63/456,584 filed April 3, 2023.
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Additional details
- Eli and Edythe Broad Foundation
- Edward Mallinckrodt Jr. Foundation
- Caltech groups
- Division of Biology and Biological Engineering