Published January 4, 2024 | Published
Journal Article Open

Human cerebellar organoids with functional Purkinje cells

Abstract

Research on human cerebellar development and disease has been hampered by the need for a human cell-based system that recapitulates the human cerebellum’s cellular diversity and functional features. Here, we report a human organoid model (human cerebellar organoids [hCerOs]) capable of developing the complex cellular diversity of the fetal cerebellum, including a human-specific rhombic lip progenitor population that have never been generated in vitro prior to this study. 2-month-old hCerOs form distinct cytoarchitectural features, including laminar organized layering, and create functional connections between inhibitory and excitatory neurons that display coordinated network activity. Long-term culture of hCerOs allows healthy survival and maturation of Purkinje cells that display molecular and electrophysiological hallmarks of their in vivo counterparts, addressing a long-standing challenge in the field. This study therefore provides a physiologically relevant, all-human model system to elucidate the cell-type-specific mechanisms governing cerebellar development and disease.

Copyright and License

© 2023 Elsevier.

Acknowledgement

We thank Karl Herold, Kelsey Hiton, Nicolette Pirjanian, and Tiantian Xu for experimental assistance. We thank Kuo-Chang Tseng for computational and imaging assistance. We thank current/former members of the Quadrato lab for insightful discussions and feedback. We thank Cristy Lytal for editing the manuscript. We thank Seth Walter Ruffins and the Optical Imaging Facility at USC for providing guidance and support of imaging analyses. We thank Kirsten Frieda at Spatial Genomics for being the point-person on the spatial transcriptomics portion of the project. We thank Justin Ichida, Jasper Janssens, and Yifu Han for thoughtful feedback on experimental design. We thank Prof. Huizhong Tao from Zilkha Neurogenetic InstituteUSC, for sharing the patch-clamp setup and Dr. Can Tao, who provided essential suggestions for patch-clamp recordings. We thank our funding sources for allowing us to conduct our research: the Robert E. and May R. Wright Foundation, the Eli and Edythe Broad Foundation, and the Edward Mallinckdot, Jr. Foundation. The graphical abstract was made using BioRender.

Contributions

A.A., M.B., and G.Q. conceived the experiments. A.A., N.H., A.S., and A.D. generated, cultured, and characterized all organoids used in this study. A.A. and T.N. performed scRNA-seq experiments. T.N. performed scRNA-seq analysis and worked on cell type assignments and data analysis with assistance from A.A. S.P. performed sample preparation for spatial transcriptomics, whereas N.T. and R.T. performed analysis of the spatial transcriptomics. M.B., N.H., and R.S. performed the calcium imaging and analysis. M.B. conducted whole-cell patch-clamp recordings and analysis. M.P.C. generated the D2 iPSC line. C.L. designed and generated the constructs to optogenetically silence Purkinje neurons and produced lentiviral particles to infect organoids. G.Q. supervised all aspects of the project. A.A., M.B., and G.Q. wrote the manuscript with contributions from all authors.

Conflict of Interest

The following patent has been filed by A.A. and G.Q.: U.S. Provisional Application Serial No. 63/456,584 filed April 3, 2023.

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Additional details

Created:
March 11, 2024
Modified:
March 11, 2024