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Published June 20, 2012 | Published
Journal Article Open

Catalytic Protein Modification with Dirhodium Metallopeptides: Specificity in Designed and Natural Systems

Abstract

In this study, we present advances in the use of rhodium(II) metallopeptides for protein modification. Site-specific, proximity-driven modification is enabled by the unique combination of peptide-based molecular recognition and a rhodium catalyst capable of modifying a wide range of amino-acid side chains. We explore catalysis based on coiled-coil recognition in detail, providing an understanding of the determinants of specificity and culminating in the demonstration of orthogonal modification of separate proteins in cell lysate. In addition, the concepts of proximity-driven catalysis are extended to include modification of the natural Fyn SH3 domain with metallopeptides based on a known proline-rich peptide ligand. The development of orthogonal catalyst–substrate pairs for modification in lysate, and the extension of these methods to new natural protein domains, highlight the capabilities for new reaction design possible in chemical approaches to site-specific protein modification.

Copyright and License

© 2012 American Chemical Society.

Acknowledgement

This work was funded by an NSF CAREER award (Z.T.B., CHE-1055569), the John S. Dunn Gulf Coast Consortium for Chemical Genomics Robert A. Welch Collaborative Grant Program, the Virginia and L. E. Simmons Family Foundation, the G. Harold and Leila Y. Mathers Foundation, and the Robert A. Welch Foundation research grant C-1680. We thank Chris Pennington for LC–MS/MS expertise and analysis. We thank Bonnie Bartel for providing the GST plasmid.

Conflict of Interest

The authors declare no competing financial interest.

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January 31, 2024
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